RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 IGKV1OR2-108A0A075B7D4 117 aa13.45□□□□□ -0.26
TRIM39-205ENST00000396551 H7BYZ3 331 aa13.45□□□□□ -0.26
TRIM39-205ENST00000396551 NDUFB4O95168 129 aa13.45□□□□□ -0.26
TRIM39-205ENST00000396551 RNASE2P10153 161 aaKnown RBP13.45□□□□□ -0.26
TRIM39-205ENST00000396551 CHRNB4P30926 498 aa13.45□□□□□ -0.26
TRIM39-205ENST00000396551 NABP2Q9BQ15 211 aa13.45□□□□□ -0.26
TRIM39-205ENST00000396551 TMEM204Q9BSN7 226 aa13.45□□□□□ -0.26
TRIM39-205ENST00000396551 KAAG1Q9UBP8 84 aa13.45□□□□□ -0.26
TRIM39-205ENST00000396551 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.44□□□□□ -0.26
TRIM39-205ENST00000396551 E7EUB6 86 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 VENTXO95231 258 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 MLANAQ16655 118 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 C2orf83Q53S99 150 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 OR5B3Q8NH48 314 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 ST6GALNAC6Q969X2 333 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 YTHDF2Q9Y5A9 579 aaKnown RBP13.44□□□□□ -0.26
TRIM39-205ENST00000396551 GATCO43716 136 aaKnown RBP13.44□□□□□ -0.26
TRIM39-205ENST00000396551 FOXH1O75593 365 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 GALR1P47211 349 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 CDX1P47902 265 aaPredicted RBP13.44□□□□□ -0.26
TRIM39-205ENST00000396551 LINC00311Q8N616 119 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 TCEAL7Q9BRU2 100 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 FKBP11Q9NYL4 201 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 SLC45A2Q9UMX9 530 aa13.44□□□□□ -0.26
TRIM39-205ENST00000396551 S100A9P06702 114 aaKnown RBP13.43□□□□□ -0.26
TRIM39-205ENST00000396551 GCHFRP30047 84 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 LINC01551Q86U37 167 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 ZNF114Q8NC26 417 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 OR5T1Q8NG75 326 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 OR10X1Q8NGY0 326 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 NDUFA4L2Q9NRX3 87 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 F6UZH7 168 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 APOBEC3AP31941 199 aaPredicted RBP13.43□□□□□ -0.26
TRIM39-205ENST00000396551 TMEM155Q4W5P6 130 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 AURKAIP1Q9NWT8 199 aaPredicted RBP13.43□□□□□ -0.26
TRIM39-205ENST00000396551 IGHV1-69-2A0A0G2JMI3 117 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 RHOBP62745 196 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 RAB31Q13636 194 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 C4orf17Q53FE4 359 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 C9orf152Q5JTZ5 239 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 TMEM144Q7Z5S9 345 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 C11orf42Q8N5U0 333 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 C8orf31Q8N9H6 132 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 LINC01560Q8TB33 94 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 FLYWCH2Q96CP2 140 aaKnown RBP13.43□□□□□ -0.26
TRIM39-205ENST00000396551 ANAPC16Q96DE5 110 aa13.43□□□□□ -0.26
TRIM39-205ENST00000396551 PGPEP1LA6NFU8 196 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 TGOLN2O43493 480 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 GAMTQ14353 236 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 CLEC12BQ2HXU8 276 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 GFI1BQ5VTD9 330 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 OR1L8Q8NGR8 309 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 TRBV20OR9-2A0A075B6H5 130 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 SCO2A0A1W2PP80 73 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 CGB1A6NKQ9 187 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 TMEM11P17152 192 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 SRD5A3Q9H8P0 318 aa13.42□□□□□ -0.26
TRIM39-205ENST00000396551 IGLV2-23P01705 113 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 CD3EP07766 207 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 GRNP28799 593 aaKnown RBP13.41□□□□□ -0.26
TRIM39-205ENST00000396551 RPL8P62917 257 aaKnown RBP13.41□□□□□ -0.26
TRIM39-205ENST00000396551 FAM71F2Q6NXP2 309 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 MIR17HGQ75NE6 70 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 TMEM186Q96B77 213 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 MSRB2Q9Y3D2 182 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 A0A087X0M5 115 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 A0A1B0GX30 115 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 GATA2P23769 480 aaPredicted RBP13.41□□□□□ -0.26
TRIM39-205ENST00000396551 OR5B12Q96R08 314 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 B9A039 149 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 LYNX1G3V0Z9 82 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 SIAH2O43255 324 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 ACTL6BO94805 426 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 SOD3P08294 240 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 LYNX1P0DP58 116 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 PDPNQ86YL7 162 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 OR4P4Q8NGL7 312 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 OR4C13Q8NGP0 309 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 TMEM167AQ8TBQ9 72 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 TXNDC17Q9BRA2 123 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 COL25A1Q9BXS0 654 aaPredicted RBP13.41□□□□□ -0.26
TRIM39-205ENST00000396551 COMMD5Q9GZQ3 224 aa13.41□□□□□ -0.26
TRIM39-205ENST00000396551 C1QTNF9P0C862 333 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 IGHV1-8P0DP01 117 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 OR10J1P30954 320 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 CHRNA7P36544 502 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 ZNF137PP52743 207 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 C10orf55Q5SWW7 151 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 FAM78BQ5VT40 261 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 OR4X1Q8NH49 305 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 OR9G1Q8NH87 305 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 PCGF1Q9BSM1 259 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 FAM90A27PA6NNH2 459 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 USF1P22415 310 aaPredicted RBP13.4□□□□□ -0.26
TRIM39-205ENST00000396551 S100PP25815 95 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 ATP5IP56385 69 aaPredicted RBP13.4□□□□□ -0.26
TRIM39-205ENST00000396551 CD69Q07108 199 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 SVIPQ8NHG7 77 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 RITA1Q96K30 269 aa13.4□□□□□ -0.26
TRIM39-205ENST00000396551 DLX1P56177 255 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms