RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 RAXQ9Y2V3 346 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 POLEQ07864 2286 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 TLN1Q9Y490 2541 aaKnown RBP13.6□□□□□ -0.23
NUP50-202ENST00000396096 PHOX2AO14813 284 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST1H2BKO60814 126 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 TRGC2P03986 189 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST1H2BJP06899 126 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST1H2BOP23527 126 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 IL3RAP26951 378 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST1H2BBP33778 126 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 GPX4P36969 197 aaPredicted RBP13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST1H2BDP58876 126 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST1H2BCP62807 126 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 ERHP84090 104 aaKnown RBP13.6□□□□□ -0.23
NUP50-202ENST00000396096 CD69Q07108 199 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 GAMTQ14353 236 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST2H2BEQ16778 126 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.6□□□□□ -0.23
NUP50-202ENST00000396096 TGIF2LXQ8IUE1 241 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 OR51G1Q8NGK1 321 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST1H2BHQ93079 126 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST1H2BNQ99877 126 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 HIST1H2BMQ99879 126 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 TMEM204Q9BSN7 226 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 ARL2-SNX15V9GYD0 113 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 DMXL2Q8TDJ6 3036 aa13.6□□□□□ -0.23
NUP50-202ENST00000396096 PKDREJQ9NTG1 2253 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 FAM90A27PA6NNH2 459 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 DLL1O00548 723 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 SIAH2O43255 324 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 MT-CO2P00403 227 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 CD99P14209 185 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 NHLH1Q02575 133 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 SPATA31B1PQ5VZV4 182 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 MUC15Q8N387 334 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 OR10W1Q8NGF6 305 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 C19orf24Q9BVV8 132 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 RALYQ9UKM9 306 aaKnown RBP13.59□□□□□ -0.23
NUP50-202ENST00000396096 IGKV1OR2-108A0A075B7D4 117 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 CCL21O00585 134 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 S100PP25815 95 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 GALR1P47211 349 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 ZNF672Q499Z4 452 aaPredicted RBP13.59□□□□□ -0.23
NUP50-202ENST00000396096 ZNF841Q6ZN19 808 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 LINC01551Q86U37 167 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 OR5B12Q96R08 314 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 SRD5A3Q9H8P0 318 aa13.59□□□□□ -0.23
NUP50-202ENST00000396096 CGB1A6NKQ9 187 aa13.58□□□□□ -0.24
NUP50-202ENST00000396096 NDUFB4O95168 129 aa13.58□□□□□ -0.24
NUP50-202ENST00000396096 IGHV2-70P01814 119 aa13.58□□□□□ -0.24
NUP50-202ENST00000396096 PPOXP50336 477 aa13.58□□□□□ -0.24
NUP50-202ENST00000396096 MOB3BQ86TA1 216 aa13.58□□□□□ -0.24
NUP50-202ENST00000396096 FUT9Q9Y231 359 aa13.58□□□□□ -0.24
NUP50-202ENST00000396096 YTHDF2Q9Y5A9 579 aaKnown RBP13.58□□□□□ -0.24
NUP50-202ENST00000396096 RBP4P02753 201 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 S100A9P06702 114 aaKnown RBP13.57□□□□□ -0.24
NUP50-202ENST00000396096 AREGP15514 252 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 COL8A2P25067 703 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 GRNP28799 593 aaKnown RBP13.57□□□□□ -0.24
NUP50-202ENST00000396096 SRP14P37108 136 aaKnown RBP13.57□□□□□ -0.24
NUP50-202ENST00000396096 CDX1P47902 265 aaPredicted RBP13.57□□□□□ -0.24
NUP50-202ENST00000396096 LGALS7P47929 136 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 HLA-DRB5Q30154 266 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 VMA21Q3ZAQ7 101 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 C11orf52Q96A22 123 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 FAM122AQ96E09 287 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 ZNF430Q9H8G1 570 aaPredicted RBP13.57□□□□□ -0.24
NUP50-202ENST00000396096 CHODLQ9H9P2 273 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 E7EUB6 86 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 OR10J1P30954 320 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 NDUFA6P56556 154 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 SLC16A13Q7RTY0 426 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 RNASEH2CQ8TDP1 164 aaKnown RBP13.57□□□□□ -0.24
NUP50-202ENST00000396096 FRZBQ92765 325 aa13.57□□□□□ -0.24
NUP50-202ENST00000396096 GGCTO75223 188 aaKnown RBP13.56□□□□□ -0.24
NUP50-202ENST00000396096 IGLV1-47P01700 117 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 OR5G3P0C626 314 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 TRGC1P0CF51 173 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 ADORA2A-AS1P86434 159 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 WT1-ASQ06250 92 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 MRGPRG-AS1Q2M3A8 158 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 FAM78BQ5VT40 261 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 MIR17HGQ75NE6 70 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 OR4P4Q8NGL7 312 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 C8orf46Q8TAG6 207 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 DERL1Q9BUN8 251 aa13.56□□□□□ -0.24
NUP50-202ENST00000396096 IGHV2-26A0A0B4J1V2 119 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 PPP1R2P9O14990 202 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 FOXH1O75593 365 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 PRRX1P54821 245 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 S100A12P80511 92 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 TEX45Q8NA69 505 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 IMMP2LQ96T52 175 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 TMEM167BQ9NRX6 74 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 TECRQ9NZ01 308 aaKnown RBP13.55□□□□□ -0.24
NUP50-202ENST00000396096 ELOA3CA0A087WX78 387 aaPredicted RBP13.55□□□□□ -0.24
NUP50-202ENST00000396096 SCO2A0A1W2PP80 73 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 SUB1P53999 127 aaKnown RBP eCLIP13.55□□□□□ -0.24
NUP50-202ENST00000396096 MLANAQ16655 118 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 BEND2Q8NDZ0 799 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms