RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ACACAQ13085 2346 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 FAM167A-AS1Q96KT0 104 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 FNDC4Q9H6D8 234 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-202ENST00000394888 J3QR06 171 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 CXorf1O96002 111 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 FRMD6-AS1P0C7T7 363 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 CD99P14209 185 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 IL3RAP26951 378 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 CLEC12BQ2HXU8 276 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 PDZD11Q5EBL8 140 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 LINC00311Q8N616 119 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 OCC1Q8TAD7 63 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 RNASE6Q93091 150 aaKnown RBP12.43□□□□□ -0.42
CPSF7-202ENST00000394888 SLC35D1Q9NTN3 355 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 SOX15O60248 233 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 LINC00310P59036 64 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 ZNF841Q6ZN19 808 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 OR9G1Q8NH87 305 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 KAAG1Q9UBP8 84 aa12.43□□□□□ -0.42
CPSF7-202ENST00000394888 RPL31P62899 125 aaKnown RBP12.42□□□□□ -0.42
CPSF7-202ENST00000394888 ANAPC16Q96DE5 110 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 PLAUP00749 431 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 IGLV2-8P01709 118 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 RPP30P78346 268 aaKnown RBP12.42□□□□□ -0.42
CPSF7-202ENST00000394888 OR10G8Q8NGN5 311 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 OR1L8Q8NGR8 309 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 TMEM106BQ9NUM4 274 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 PRNDQ9UKY0 176 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 ELOA3CA0A087WX78 387 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-202ENST00000394888 MFAP2P55001 183 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 FAM3BP58499 235 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-202ENST00000394888 TMEM155Q4W5P6 130 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 C10orf55Q5SWW7 151 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 TP53TG3Q9ULZ0 132 aa12.42□□□□□ -0.42
CPSF7-202ENST00000394888 TLN1Q9Y490 2541 aaKnown RBP12.42□□□□□ -0.42
CPSF7-202ENST00000394888 TRBV23-1A0A0A0MS06 115 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 hADV38S2A0JD32 116 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 K7ENP7 123 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 AMBPP02760 352 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 AREGP15514 252 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 REG1BP48304 166 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 ZNF714Q96N38 554 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 GAR1Q9NY12 217 aaKnown RBP12.41□□□□□ -0.42
CPSF7-202ENST00000394888 RP1L1Q8IWN7 2480 aaPredicted RBP12.41□□□□□ -0.42
CPSF7-202ENST00000394888 ROS1P08922 2347 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 MKRN2OSH3BPM6 223 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 CRYGBP07316 175 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 CHRNB4P30926 498 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 CHRNA7P36544 502 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 SRP14P37108 136 aaKnown RBP12.41□□□□□ -0.42
CPSF7-202ENST00000394888 DMRT1Q9Y5R6 373 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 GGTLC3B5MD39 225 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 DVL1O14640 695 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 OR5G3P0C626 314 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 GRNP28799 593 aaKnown RBP12.41□□□□□ -0.42
CPSF7-202ENST00000394888 LGALS4P56470 323 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 TMEM183AQ8IXX5 376 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 PNKDQ8N490 385 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 OR10D4PQ8NGN7 298 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 MALRD1Q5VYJ5 2156 aa12.41□□□□□ -0.42
CPSF7-202ENST00000394888 NDUFB7P17568 137 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 LDLRAD2Q5SZI1 272 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 SFRP2Q96HF1 295 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 LRFN3Q9BTN0 628 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 SLC25A2Q9BXI2 301 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 SAP30LQ9HAJ7 183 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 F6UZH7 168 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 H7BYZ3 331 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 TEX38Q6PEX7 206 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 UNQ6494/PRO21346Q6UXR6 183 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 PATE2Q6UY27 113 aa12.4□□□□□ -0.42
CPSF7-202ENST00000394888 OSR1Q8TAX0 266 aaPredicted RBP12.4□□□□□ -0.42
CPSF7-202ENST00000394888 PPIAL4EA0A075B759 164 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 A0A1B0GUS0 222 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 PPIAL4DF5H284 164 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 NUPR1O60356 82 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 PPIAL4FP0DN26 164 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 FOXL1Q12952 345 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 OR5B3Q8NH48 314 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 TMEM167AQ8TBQ9 72 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 IMMP2LQ96T52 175 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 SH3BGRL2Q9UJC5 107 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 PPIAL4AQ9Y536 164 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 POLEQ07864 2286 aa12.4□□□□□ -0.43
CPSF7-202ENST00000394888 PKDREJQ9NTG1 2253 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 TNFSF4P23510 183 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 CD69Q07108 199 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 FAM71F2Q6NXP2 309 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 OR2T6Q8NHC8 308 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 PTPRQQ9UMZ3 2332 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 PRRG2O14669 202 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 TGOLN2O43493 480 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 TNFRSF1AP19438 455 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 FBLN7Q53RD9 439 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 GFRALQ6UXV0 394 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 RNASEH2CQ8TDP1 164 aaKnown RBP12.39□□□□□ -0.43
CPSF7-202ENST00000394888 IGF2BP2-AS1Q96M15 143 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 FUT9Q9Y231 359 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 CST9LP1Q5W188 147 aa12.39□□□□□ -0.43
CPSF7-202ENST00000394888 A0A1W2PPV4 95 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms