RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 MUC21Q5SSG8 566 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 OR1B1Q8NGR6 318 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 OR2V2Q96R30 315 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 TM2D1Q9BX74 207 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 GNB4Q9HAV0 340 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 CUL9Q8IWT3 2517 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 PHF3Q92576 2039 aaKnown RBP4.77□□□□□ -1.65
RFFL-202ENST00000394597 PROB1E7EW31 1015 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 K7ENP7 123 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 K7EP13 123 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 CXorf1O96002 111 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 PPBPP02775 128 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 GPX1P07203 203 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 CELA3BP08861 270 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 F2RP25116 425 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 CA7P43166 264 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 PSG7Q13046 419 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 ZNF826PQ6ZT77 177 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 OR8A1Q8NGG7 326 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 OR4P4Q8NGL7 312 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 TMEM171Q8WVE6 324 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 SSMEM1Q8WWF3 244 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 MBD3L1Q8WWY6 194 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 GPR146Q96CH1 333 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 ADTRPQ96IZ2 230 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 TAAR6Q96RI8 345 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 TXNDC17Q9BRA2 123 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 PLA2G2EQ9NZK7 142 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 FBXL7Q9UJT9 491 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 HILPDAQ9Y5L2 63 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 IL18BPO95998 194 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 AMY1AP04745 511 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 NPY1RP25929 384 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 LGALS4P56470 323 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 RTL8BQ17RB0 113 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 IBA57Q5T440 356 aaKnown RBP4.77□□□□□ -1.65
RFFL-202ENST00000394597 RBMXL3Q8N7X1 1067 aaKnown RBP4.77□□□□□ -1.65
RFFL-202ENST00000394597 OR10X1Q8NGY0 326 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 ITLN1Q8WWA0 313 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 DOCK10Q96BY6 2186 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 SNRNP40Q96DI7 357 aaKnown RBP4.77□□□□□ -1.65
RFFL-202ENST00000394597 LRP4O75096 1905 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 SERTM2A0A1B0GWG4 89 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 DEFB108AA8MXU0 73 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 OR2H2O95918 312 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 NAPSAO96009 420 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 ATP5G3P48201 142 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 CCL8P80075 99 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 PSG9Q00887 426 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 PSG5Q15238 335 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 LRRC75BQ2VPJ9 315 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 RTN4RL2Q86UN3 420 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 RAB1CQ92928 201 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 ATP6V0BQ99437 205 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 IL36GQ9NZH8 169 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 ZNF407Q9C0G0 2248 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 IGHV3OR15-7A0A075B7D8 119 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 MBD3L4A6NDZ8 208 aaPredicted RBP4.77□□□□□ -1.65
RFFL-202ENST00000394597 MBD3L3A6NE82 208 aaPredicted RBP4.77□□□□□ -1.65
RFFL-202ENST00000394597 MBD3L5A6NJ08 208 aaPredicted RBP4.77□□□□□ -1.65
RFFL-202ENST00000394597 IQCF6A8MYZ5 107 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 TMPRSS2O15393 492 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 CD40P25942 277 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 RAB9AP51151 201 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 FOXL1Q12952 345 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 TMEM97Q5BJF2 176 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 MBD3L2Q8NHZ7 208 aaPredicted RBP4.77□□□□□ -1.65
RFFL-202ENST00000394597 GATAD1Q8WUU5 269 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 PLPPR2Q96GM1 343 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 CHODLQ9H9P2 273 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 ST20Q9HBF5 79 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 PSG11Q9UQ72 335 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 OR2W1Q9Y3N9 320 aa4.77□□□□□ -1.65
RFFL-202ENST00000394597 KIAA2026Q5HYC2 2103 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 PPIAL4EA0A075B759 164 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 E9PLN8 166 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 PPIAL4FP0DN26 164 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 WT1P19544 449 aaPredicted RBP4.76□□□□□ -1.65
RFFL-202ENST00000394597 MC5RP33032 325 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 RPL31P62899 125 aaKnown RBP4.76□□□□□ -1.65
RFFL-202ENST00000394597 ASPHD2Q6ICH7 369 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 PQLC2Q6ZP29 291 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 OR5A1Q8NGJ0 315 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 C18orf12Q96KH6 178 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 VKORC1Q9BQB6 163 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 ATG2AQ2TAZ0 1938 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 MUC6Q6W4X9 2439 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 IGKV1D-8A0A087WSZ0 117 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 IGHV3-43A0A0B4J1X8 118 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 H0Y980 276 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 MGST3O14880 152 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 HBZP02008 142 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 IGHV3-43DP0DP04 118 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 ZNF137PP52743 207 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 HIST1H1AQ02539 215 aaPredicted RBP4.76□□□□□ -1.65
RFFL-202ENST00000394597 DOLPP1Q86YN1 238 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 C5orf30Q96GV9 206 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 PMCHL2Q9BQD1 86 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 THYN1Q9P016 225 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 ZNF257Q9Y2Q1 563 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms