RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 C1orf162Q8NEQ5 155 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-203ENST00000394419 OR9G1Q8NH87 305 aa8.68□□□□□ -1.02
ACTN1-203ENST00000394419 BLNKQ8WV28 456 aa8.68□□□□□ -1.02
ACTN1-203ENST00000394419 RNASE7Q9H1E1 156 aaKnown RBP8.68□□□□□ -1.02
ACTN1-203ENST00000394419 CBLN4Q9NTU7 201 aa8.68□□□□□ -1.02
ACTN1-203ENST00000394419 IGF2RP11717 2491 aa8.68□□□□□ -1.02
ACTN1-203ENST00000394419 NKX6-3A6NJ46 265 aa8.68□□□□□ -1.02
ACTN1-203ENST00000394419 OR4A8P0C604 315 aa8.68□□□□□ -1.02
ACTN1-203ENST00000394419 HLA-DRB5Q30154 266 aa8.68□□□□□ -1.02
ACTN1-203ENST00000394419 ZNF664Q8N3J9 261 aa8.68□□□□□ -1.02
ACTN1-203ENST00000394419 TBX15Q96SF7 602 aa8.68□□□□□ -1.02
ACTN1-203ENST00000394419 PAM16Q9Y3D7 125 aa8.68□□□□□ -1.02
ACTN1-203ENST00000394419 hADV38S2A0JD32 116 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 C15orf61A6NNL5 157 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 STAG3L2P0CL84 134 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 STAG3L3P0CL85 134 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 ORM2P19652 201 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 ADMP35318 185 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 KIR2DS2P43631 304 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 UBE2L3P68036 154 aaKnown RBP8.67□□□□□ -1.02
ACTN1-203ENST00000394419 CORO2AQ92828 525 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 MISP3Q96FF7 219 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 SSBP3Q9BWW4 388 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-203ENST00000394419 PARD6GQ9BYG4 376 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-203ENST00000394419 MRPL18Q9H0U6 180 aaKnown RBP8.67□□□□□ -1.02
ACTN1-203ENST00000394419 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 ANKHD1Q8IWZ3 2542 aaKnown RBP8.67□□□□□ -1.02
ACTN1-203ENST00000394419 ZNF891A8MT65 544 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-203ENST00000394419 H3BTX0 84 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 DSCAMO60469 2012 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 CENPWQ5EE01 88 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 TIMM23BQ5SRD1 257 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 C10orf55Q5SWW7 151 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 MBNL2Q5VZF2 373 aaKnown RBP8.67□□□□□ -1.02
ACTN1-203ENST00000394419 C1orf229Q6ZS94 237 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-203ENST00000394419 OR2T6Q8NHC8 308 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 VN1R17PQ8TDU5 208 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 DKK4Q9UBT3 224 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 SLC25A10Q9UBX3 287 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-203ENST00000394419 SLC45A2Q9UMX9 530 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 TRBV20OR9-2A0A075B6H5 130 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 COX7A2P2O60397 106 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 CA1P00915 261 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-203ENST00000394419 RPEL1Q2QD12 228 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 HCP5Q6MZN7 132 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 HSPB9Q9BQS6 159 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 IDI2-AS1Q9NZ38 188 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 PRNDQ9UKY0 176 aa8.67□□□□□ -1.02
ACTN1-203ENST00000394419 A0A1B0GWJ7 208 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 P0C879 139 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 VDAC2P45880 294 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-203ENST00000394419 LOXL3P58215 753 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 TAS2R45P59539 299 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 TEX38Q6PEX7 206 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 REC114Q7Z4M0 266 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 CENPVQ7Z7K6 275 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-203ENST00000394419 SAP30LQ9HAJ7 183 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 TECRQ9NZ01 308 aaKnown RBP8.66□□□□□ -1.02
ACTN1-203ENST00000394419 TRAV5A0A0B4J249 113 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 TRAV34A0A0B4J273 112 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 PRRG2O14669 202 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 IGHV1-46P01743 117 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 TAS2R60P59551 318 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 PLGLAQ15195 96 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 TMEM108Q6UXF1 575 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 MMD2Q8IY49 270 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 BTF3L4Q96K17 158 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 PARD6AQ9NPB6 346 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 SSUH2Q9Y2M2 353 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 GGCTO75223 188 aaKnown RBP8.66□□□□□ -1.02
ACTN1-203ENST00000394419 CAMPP49913 170 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 DLX1P56177 255 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 SP5Q6BEB4 398 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-203ENST00000394419 SIGLECL1Q8N7X8 197 aa8.66□□□□□ -1.02
ACTN1-203ENST00000394419 MRPL20Q9BYC9 149 aaKnown RBP8.66□□□□□ -1.02
ACTN1-203ENST00000394419 SAA1P0DJI8 122 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-203ENST00000394419 TNFRSF1AP19438 455 aa8.65□□□□□ -1.02
ACTN1-203ENST00000394419 RANP62826 216 aaKnown RBP8.65□□□□□ -1.02
ACTN1-203ENST00000394419 ACTL10Q5JWF8 245 aa8.65□□□□□ -1.02
ACTN1-203ENST00000394419 C1orf185Q5T7R7 199 aa8.65□□□□□ -1.02
ACTN1-203ENST00000394419 FLYWCH2Q96CP2 140 aaKnown RBP8.65□□□□□ -1.02
ACTN1-203ENST00000394419 ADTRPQ96IZ2 230 aa8.65□□□□□ -1.02
ACTN1-203ENST00000394419 IL19Q9UHD0 177 aa8.65□□□□□ -1.02
ACTN1-203ENST00000394419 VSTM5A8MXK1 200 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 ZNF253O75346 499 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 GCGP01275 180 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 WNT2P09544 360 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 LINC00869P0C866 280 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 CD40P25942 277 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 CCKARP32238 428 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 AMTP48728 403 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 TPPP2P59282 170 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 C17orf58Q2M2W7 97 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 OR5AU1Q8NGC0 362 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 NPIPB3Q92617 1050 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 LINC00479Q96M42 142 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 TACC2O95359 2948 aa8.65□□□□□ -1.03
ACTN1-203ENST00000394419 K7EM74 188 aa8.64□□□□□ -1.03
ACTN1-203ENST00000394419 SLC25A17O43808 307 aa8.64□□□□□ -1.03
ACTN1-203ENST00000394419 NUPR1O60356 82 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms