RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 ZNF324BQ6AW86 544 aaPredicted RBP12.13□□□□□ -0.47
PSME4-201ENST00000389993 CYP2G1PQ6ZSU1 146 aa12.13□□□□□ -0.47
PSME4-201ENST00000389993 DPM3Q9P2X0 92 aa12.13□□□□□ -0.47
PSME4-201ENST00000389993 K7EM74 188 aa12.13□□□□□ -0.47
PSME4-201ENST00000389993 C8orf88P0DMB2 117 aa12.13□□□□□ -0.47
PSME4-201ENST00000389993 RIGQ13278 110 aa12.13□□□□□ -0.47
PSME4-201ENST00000389993 USF3Q68DE3 2245 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 GCHFRP30047 84 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 ZNF273Q14593 569 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 PAFAH1B2P68402 229 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 DUX4L9Q6RFH8 374 aaPredicted RBP12.12□□□□□ -0.47
PSME4-201ENST00000389993 OR10J6PQ8NGY7 276 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 IMMP2LQ96T52 175 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 TRAV40A0A0B4J280 105 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 IGKV3OR2-268A0A0C4DH90 116 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 MEOX2P50222 304 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 ARL6IP6Q8N6S5 226 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 IGFBPL1Q8WX77 278 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 DCAF16Q9NXF7 216 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 RELQ04864 619 aaPredicted RBP12.12□□□□□ -0.47
PSME4-201ENST00000389993 Q6ZN92 141 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 BPIFA4PQ86YQ2 179 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 COL8A2P25067 703 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 CENPWQ5EE01 88 aa12.12□□□□□ -0.47
PSME4-201ENST00000389993 FOXH1O75593 365 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 UCP1P25874 307 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 WDR73Q6P4I2 378 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 PLSCR4Q9NRQ2 329 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 THBDP07204 575 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 UNQ6494/PRO21346Q6UXR6 183 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 CRIM1Q9NZV1 1036 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 SLC25A15Q9Y619 301 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 HIST1H1AQ02539 215 aaPredicted RBP12.11□□□□□ -0.47
PSME4-201ENST00000389993 ZNF672Q499Z4 452 aaPredicted RBP12.11□□□□□ -0.47
PSME4-201ENST00000389993 TMEM200BQ69YZ2 307 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 COLCA1Q6ZS62 124 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 TBX15Q96SF7 602 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 TIMM23O14925 209 aa12.11□□□□□ -0.47
PSME4-201ENST00000389993 CRXO43186 299 aaPredicted RBP12.11□□□□□ -0.47
PSME4-201ENST00000389993 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 YAE1D1Q9NRH1 226 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 RNF24Q9Y225 148 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 NUP210Q8TEM1 1887 aaPredicted RBP12.1□□□□□ -0.47
PSME4-201ENST00000389993 CCL20P78556 96 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 NRN1LQ496H8 165 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 KLF17Q5JT82 389 aaPredicted RBP12.1□□□□□ -0.47
PSME4-201ENST00000389993 PPP1R27Q86WC6 154 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 CBLN4Q9NTU7 201 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 PYYP10082 97 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 WT1P19544 449 aaPredicted RBP12.1□□□□□ -0.47
PSME4-201ENST00000389993 ID1P41134 155 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 MRPL18Q9H0U6 180 aaKnown RBP12.1□□□□□ -0.47
PSME4-201ENST00000389993 IFI27L2Q9H2X8 130 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 TMEM56-RWDD3S4R434 201 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 CBLN1P23435 193 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 RELBQ01201 579 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 MBNL2Q5VZF2 373 aaKnown RBP12.1□□□□□ -0.47
PSME4-201ENST00000389993 EBLN2Q6P2I7 272 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 ARPC1AQ92747 370 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 LINC00312Q9Y6C7 94 aa12.1□□□□□ -0.47
PSME4-201ENST00000389993 TRAV5A0A0B4J249 113 aa12.09□□□□□ -0.47
PSME4-201ENST00000389993 FOXA3P55318 350 aaPredicted RBP12.09□□□□□ -0.47
PSME4-201ENST00000389993 CX3CL1P78423 397 aa12.09□□□□□ -0.47
PSME4-201ENST00000389993 LHFPL5Q8TAF8 219 aa12.09□□□□□ -0.47
PSME4-201ENST00000389993 HSPB9Q9BQS6 159 aa12.09□□□□□ -0.47
PSME4-201ENST00000389993 LOC102724200A0A096LPH7 203 aaPredicted RBP12.09□□□□□ -0.47
PSME4-201ENST00000389993 C9JCJ5 164 aa12.09□□□□□ -0.47
PSME4-201ENST00000389993 SPTAN1Q13813 2472 aaKnown RBP12.09□□□□□ -0.47
PSME4-201ENST00000389993 B4DEV8 164 aa12.09□□□□□ -0.47
PSME4-201ENST00000389993 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
PSME4-201ENST00000389993 VKORC1Q9BQB6 163 aa12.09□□□□□ -0.47
PSME4-201ENST00000389993 GGCTO75223 188 aaKnown RBP12.08□□□□□ -0.48
PSME4-201ENST00000389993 SUPT4H1P63272 117 aaKnown RBP12.08□□□□□ -0.48
PSME4-201ENST00000389993 ISLRO14498 428 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 GPX1P07203 203 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 NPPCP23582 126 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 NMUP48645 174 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 TMEM183BQ1AE95 376 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 FAM89BQ8N5H3 189 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 MAP1LC3CQ9BXW4 147 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 TEX50A0A1B0GTY4 177 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 ACAA1P09110 424 aaPredicted RBP12.08□□□□□ -0.48
PSME4-201ENST00000389993 EMP1P54849 157 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 AGAP20933 346 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 ZNF525Q8N782 197 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 EEF1AKMT3Q96AZ1 226 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 FAM90A26D6RGX4 464 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 CYYR1Q96J86 154 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 TMEM133Q9H2Q1 129 aa12.08□□□□□ -0.48
PSME4-201ENST00000389993 MPDU1O75352 247 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 FOSL1P15407 271 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 VMO1Q7Z5L0 202 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 SFRP2Q96HF1 295 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 COL25A1Q9BXS0 654 aaPredicted RBP12.07□□□□□ -0.48
PSME4-201ENST00000389993 DOCK10Q96BY6 2186 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 CKS2P33552 79 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 PRSS33Q8NF86 280 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 WNK2Q9Y3S1 2297 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 SRIP30626 198 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 NEU4Q8WWR8 484 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms