RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 WFDC8Q8IUA0 241 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 CNOT1A5YKK6 2376 aaKnown RBP11.93□□□□□ -0.5
RTF1-201ENST00000389629 IGKV1-6A0A0C4DH72 117 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 H3BUT2 72 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 TNFAIP6P98066 277 aaPredicted RBP11.93□□□□□ -0.5
RTF1-201ENST00000389629 STXBP6Q8NFX7 210 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 OR13A1Q8NGR1 328 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 LINC00205P59089 165 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 TMEM14EPQ6UXP3 125 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 ASCL4Q6XD76 172 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 COL25A1Q9BXS0 654 aaPredicted RBP11.92□□□□□ -0.5
RTF1-201ENST00000389629 MGST3O14880 152 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 CA7P43166 264 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 PRSS8Q16651 343 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 SRSF12Q8WXF0 261 aaKnown RBP11.92□□□□□ -0.5
RTF1-201ENST00000389629 FBXL7Q9UJT9 491 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 TICRRQ7Z2Z1 1910 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 LIPFP07098 398 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 TSPOP30536 169 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 PMS2CLQ68D20 193 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 TMEM116Q8NCL8 245 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 NPIPB3Q92617 1050 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 AP5S1Q9NUS5 200 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 OBSL1O75147 1896 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 IZUMO1RA6ND01 250 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 IGKV1D-33P01593 117 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 IGKV1-33P01594 117 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 EFNB3Q15768 340 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 CCL17Q92583 94 aa11.92□□□□□ -0.5
RTF1-201ENST00000389629 LOC102723996A0A087X1L8 192 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 K7ESF4 209 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 PRRX1P54821 245 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 RPL30P62888 115 aaKnown RBP11.91□□□□□ -0.5
RTF1-201ENST00000389629 ZNF497Q6ZNH5 498 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 Q6ZVH6 145 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 TCF24Q7RTU0 167 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 GGNQ86UU5 652 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 NUDT11Q96G61 164 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
RTF1-201ENST00000389629 FOXI3A8MTJ6 420 aaPredicted RBP11.91□□□□□ -0.5
RTF1-201ENST00000389629 HYPMO75409 117 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 ORM1P02763 201 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 REG1AP05451 166 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 CELA3BP08861 270 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 RPL11P62913 178 aaKnown RBP11.91□□□□□ -0.5
RTF1-201ENST00000389629 VSTM2AQ8TAG5 236 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 TMEM265A0A087WTH1 108 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 KLF7O75840 302 aaPredicted RBP11.91□□□□□ -0.5
RTF1-201ENST00000389629 CRYABP02511 175 aaKnown RBP11.91□□□□□ -0.5
RTF1-201ENST00000389629 UBALD2Q8IYN6 164 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 ZNRF1Q8ND25 227 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 RNF115Q9Y4L5 304 aa11.91□□□□□ -0.5
RTF1-201ENST00000389629 IGHV3-72A0A0B4J1Y9 119 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 NRN1LQ496H8 165 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 TREML4Q6UXN2 200 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 ZADH2Q8N4Q0 377 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 OR10AG1Q8NH19 301 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 GRAMD2BQ96HH9 432 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 UFC1Q9Y3C8 167 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 OR9G9P0C7N8 305 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 PSG1P11464 419 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 SRSF7Q16629 238 aaKnown RBP eCLIP11.9□□□□□ -0.5
RTF1-201ENST00000389629 FOXL2NBQ6ZUU3 175 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 ZNF703Q9H7S9 590 aaPredicted RBP11.9□□□□□ -0.5
RTF1-201ENST00000389629 CALYQ9NYX4 217 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 THYN1Q9P016 225 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 KIF26AQ9ULI4 1882 aaPredicted RBP11.9□□□□□ -0.5
RTF1-201ENST00000389629 M0R296 226 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 NDUFB3O43676 98 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 FOXH1O75593 365 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 OR10J3Q5JRS4 329 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 ARHGAP21Q5T5U3 1957 aa11.9□□□□□ -0.5
RTF1-201ENST00000389629 PINLYPA6NC86 204 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 STAG3L2P0CL84 134 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 STAG3L3P0CL85 134 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 GPR183P32249 361 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 MCRIP2Q9BUT9 160 aaKnown RBP11.89□□□□□ -0.51
RTF1-201ENST00000389629 Q1RN00 199 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 DEFB109BQ30KR1 87 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 ORAOV1Q8WV07 137 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 CCL13Q99616 98 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 hDV102S1A0JD36 115 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 A1L4Q6 167 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 ETV2O00321 342 aaPredicted RBP11.89□□□□□ -0.51
RTF1-201ENST00000389629 PSG7Q13046 419 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 TDRG1Q3Y452 100 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 SCGB1D4Q6XE38 83 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 MUC21A0A0G2JKD1 596 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 MUC21A0A140T8X8 626 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 C7orf71A4D174 169 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 GNG7O60262 68 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 MOSP00540 346 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 ACP1P24666 158 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 MUC21Q5SSG8 566 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 TPTE2P1Q5T6R2 138 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 WFDC3Q8IUB2 231 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 ZNF114Q8NC26 417 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 GGTLC1Q9BX51 225 aa11.89□□□□□ -0.51
RTF1-201ENST00000389629 ZNF430Q9H8G1 570 aaPredicted RBP11.89□□□□□ -0.51
RTF1-201ENST00000389629 TNFRSF19Q9NS68 423 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms