RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 BIDP55957 195 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 MAXP61244 160 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 STXBP1P61764 594 aaKnown RBP-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 RPS4XP62701 263 aaKnown RBP-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 PAFAH1B2P68402 229 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 ELP6Q0PNE2 266 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 AIMP2Q13155 320 aaKnown RBP-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 WDR43Q15061 677 aaKnown RBP eCLIP-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 SPHARQ15513 63 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 SSX1Q16384 188 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 TTLL9Q3SXZ7 439 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 Q499Y3 187 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 MPPE1Q53F39 396 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 HSP90B2PQ58FF3 399 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 C6orf163Q5TEZ5 329 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 C1orf195Q5TG92 126 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 DPPA3Q6W0C5 159 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 ANKRD37Q7Z713 158 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 EFCAB13Q8IY85 973 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 C10orf111Q8N326 155 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 BPIFB6Q8NFQ5 453 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR2M7Q8NG81 312 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR10P1Q8NGE3 313 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR5K1Q8NHB7 308 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 JOSD2Q8TAC2 188 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 C4orf3Q8WVX3 66 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 TRUB1Q8WWH5 349 aaKnown RBP-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 FGF13Q92913 245 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 COG3Q96JB2 828 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 DERL3Q96Q80 235 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR5B12Q96R08 314 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 SSX3Q99909 188 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC30A2Q9BRI3 323 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 RHPN1-AS1Q9BWJ2 59 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 GSDMCQ9BYG8 508 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC25A31Q9H0C2 315 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 RAB17Q9H0T7 212 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 METTL8Q9H825 291 aaKnown RBP-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 CYP3A43Q9HB55 503 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 HEBP1Q9NRV9 189 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 PAK1IP1Q9NWT1 392 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 CNIH4Q9P003 139 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 GPR132Q9UNW8 380 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 PLA2G4CQ9UP65 541 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 BZW2Q9Y6E2 419 aaKnown RBP-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 ROCK2O75116 1388 aaKnown RBP-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 UHRF1BP1Q6BDS2 1440 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 DOCK2Q92608 1830 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 A0A0J9YYE9 177 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 TRBV7-4A0A0J9YYF1 115 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 TINCRA0A1B0GVN0 87 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 TRBC2A0A5B9 178 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 A6NIZ1 184 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR5K4A6NMS3 321 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 G3V318 75 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 RNASEK-C17orf49H0YIS7 233 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 SYNMO15061 1565 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 FIBPO43427 364 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 FADS1O60427 444 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 PEX11AO75192 247 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 TOM1L1O75674 476 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 SNX4O95219 450 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 IGHV3-11P01762 117 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 TRBC1P01850 177 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 HLA-HP01893 362 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 C3orf79P0CE67 100 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 AREGP15514 252 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 PYCR1P32322 319 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 CD80P33681 288 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 LINC00313P59037 77 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 RAP1BP61224 184 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 VBP1P61758 197 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 UBA52P62987 128 aaKnown RBP-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 TIAM1Q13009 1591 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 WRNQ14191 1432 aaPredicted RBP eCLIP-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 TOMM34Q15785 309 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 ITSN1Q15811 1721 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 FAM133BQ5BKY9 247 aaKnown RBP-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 C9orf116Q5BN46 136 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 PABPC1L2AQ5JQF8 200 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 CCDC137Q6PK04 289 aaKnown RBP-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 CCDC141Q6ZP82 1450 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 SSX7Q7RTT5 188 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 SLC35E3Q7Z769 313 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 TMEM17Q86X19 198 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 CCDC146Q8IYE0 955 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 ELMOD2Q8IZ81 293 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 OFCC1Q8IZS5 231 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 PDIK1LQ8N165 341 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 VN1R2Q8NFZ6 395 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR10R2Q8NGX6 335 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR6K2Q8NGY2 324 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR5J2Q8NH18 312 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 VSTM2AQ8TAG5 236 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 ERMNQ8TAM6 284 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 RDH11Q8TC12 318 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 PTP4A1Q93096 173 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 KCTD7Q96MP8 289 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR8B4Q96RC9 309 aa-2.04□□□□□ -2.74
RNU6-540P-201ENST00000384622 TRGV9Q99603 122 aa-2.04□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms