RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 IL36BQ9NZH7 164 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 KALRNO60229 2985 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 C15orf61A6NNL5 157 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 FCN1O00602 326 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 GLRXP35754 106 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 FXYD3Q14802 87 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 CT45A1Q5HYN5 189 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 ZNF705AQ6ZN79 300 aaPredicted RBP13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 OR8I2Q8N0Y5 310 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 CT45A3Q8NHU0 189 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 DDB2Q92466 427 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 RNASE7Q9H1E1 156 aaKnown RBP13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 TMEM106BQ9NUM4 274 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 PAM16Q9Y3D7 125 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 YPEL1O60688 119 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 CRISP2P16562 243 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 OR10J1P30954 320 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 GFRALQ6UXV0 394 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 PPP1R35Q8TAP8 253 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 EAF1Q96JC9 268 aaPredicted RBP13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 YPEL2Q96QA6 119 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 CALYQ9NYX4 217 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 A6NNC1 897 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 TCL1AP56279 114 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 MLANAQ16655 118 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 KIAA1644Q3SXP7 199 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 OR52E5Q8NH55 327 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 PTPRQQ9UMZ3 2332 aa13.31□□□□□ -0.28
NKX3-1-201ENST00000380871 SNURFLB1AK76 121 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 PRRG2O14669 202 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 CRYBB3P26998 211 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 PSG5Q15238 335 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 TPTE2P1Q5T6R2 138 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 ASCL5Q7RTU5 278 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 LYG1Q8N1E2 194 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 ST6GALNAC3Q8NDV1 305 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 LRFN3Q9BTN0 628 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 IGKV1OR2-108A0A075B7D4 117 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 OR10J4P0C629 311 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 LGALS4P56470 323 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 RHOBP62745 196 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 CENPWQ5EE01 88 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 MMD2Q8IY49 270 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 VN1R17PQ8TDU5 208 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 FAM103A1Q9BTL3 118 aaKnown RBP13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 A8MXE2 369 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 MGST3O14880 152 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 CD40P25942 277 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 SELENOTP62341 195 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 MZT1Q08AG7 82 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 BAGE3Q86Y29 109 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 BAGE2Q86Y30 109 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 V9GYV3 84 aa13.3□□□□□ -0.28
NKX3-1-201ENST00000380871 M0R143 59 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 C17orf58Q2M2W7 97 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 PQLC2Q6ZP29 291 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 IDI2-AS1Q9NZ38 188 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 A0A0G2JNJ9 132 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 FAM90A9PA6NNJ1 464 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 LINC00869P0C866 280 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 TDGF1P3P51864 188 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 TRAT1Q6PIZ9 186 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 IGFL3Q6UXB1 125 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 OR4S2Q8NH73 311 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 Q9UFV3 132 aa13.29□□□□□ -0.28
NKX3-1-201ENST00000380871 MMP23AO75900 390 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 IGHV1-46P01743 117 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 IGKV1-16P04430 117 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 RAB4AP20338 218 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 ZNF503Q96F45 646 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 F2RL2O00254 374 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 PRR20EP86478 221 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 PRR20CP86479 221 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 PRR20DP86480 221 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 PRR20BP86481 221 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 PRR20AP86496 221 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 GCM1Q9NP62 436 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 TMEM14BQ9NUH8 114 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 RNF7Q9UBF6 113 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 TRGV8A0A0C4DH27 118 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 TPPP2P59282 170 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 NHLRC2Q8NBF2 726 aa13.28□□□□□ -0.28
NKX3-1-201ENST00000380871 FAM87AP0C7U9 286 aa13.27□□□□□ -0.28
NKX3-1-201ENST00000380871 HSPE1P61604 102 aaKnown RBP13.27□□□□□ -0.28
NKX3-1-201ENST00000380871 RPEL1Q2QD12 228 aa13.27□□□□□ -0.28
NKX3-1-201ENST00000380871 CCL17Q92583 94 aa13.27□□□□□ -0.28
NKX3-1-201ENST00000380871 RND1Q92730 232 aa13.27□□□□□ -0.28
NKX3-1-201ENST00000380871 BTF3L4Q96K17 158 aa13.27□□□□□ -0.28
NKX3-1-201ENST00000380871 TXNDC17Q9BRA2 123 aa13.27□□□□□ -0.28
NKX3-1-201ENST00000380871 SAMD10Q9BYL1 202 aa13.27□□□□□ -0.28
NKX3-1-201ENST00000380871 GNB4Q9HAV0 340 aa13.27□□□□□ -0.28
NKX3-1-201ENST00000380871 DSCAML1Q8TD84 2053 aa13.27□□□□□ -0.29
NKX3-1-201ENST00000380871 CA1P00915 261 aaPredicted RBP13.27□□□□□ -0.29
NKX3-1-201ENST00000380871 C11orf52Q96A22 123 aa13.27□□□□□ -0.29
NKX3-1-201ENST00000380871 RCHY1Q96PM5 261 aa13.27□□□□□ -0.29
NKX3-1-201ENST00000380871 OR51B2Q9Y5P1 312 aa13.27□□□□□ -0.29
NKX3-1-201ENST00000380871 GGTLC3B5MD39 225 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 OR7C2O60412 319 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 IRF2P14316 349 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms