RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 GCM1Q9NP62 436 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 IGHV1-69-2A0A0G2JMI3 117 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 NKX2-8O15522 239 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 ARL14EPLP0DKL9 152 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 TCL1AP56279 114 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 FOXF2Q12947 444 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 RNPS1Q15287 305 aaKnown RBP10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 SPRNQ5BIV9 151 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 HES3Q5TGS1 186 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 OR10G8Q8NGN5 311 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 OR4A16Q8NH70 328 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 TNRC6AQ8NDV7 1962 aaKnown RBP10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 IGHV2-26A0A0B4J1V2 119 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 Q56UQ5 140 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 MOB3BQ86TA1 216 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 OCC1Q8TAD7 63 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 PKIBQ9C010 78 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 NAT8BQ9UHF3 227 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 MRPS16Q9Y3D3 137 aaKnown RBP10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 SCO2A0A1W2PP80 73 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 RNF212BA8MTL3 300 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 CD1BP29016 333 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 OR4F17Q8NGA8 305 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 SARAFQ96BY9 339 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 GMPPAQ96IJ6 420 aaPredicted RBP10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 WASHC3Q9Y3C0 194 aa10.32□□□□□ -0.76
PRPF40B-202ENST00000380281 GAGE12BA1L429 117 aa10.31□□□□□ -0.76
PRPF40B-202ENST00000380281 RAB29O14966 203 aa10.31□□□□□ -0.76
PRPF40B-202ENST00000380281 SPRY3O43610 288 aa10.31□□□□□ -0.76
PRPF40B-202ENST00000380281 NIT1Q86X76 327 aa10.31□□□□□ -0.76
PRPF40B-202ENST00000380281 CLEC7AQ9BXN2 247 aa10.31□□□□□ -0.76
PRPF40B-202ENST00000380281 KLF13Q9Y2Y9 288 aaPredicted RBP10.31□□□□□ -0.76
PRPF40B-202ENST00000380281 J3QW42 95 aa10.31□□□□□ -0.76
PRPF40B-202ENST00000380281 TIMP3P35625 211 aa10.31□□□□□ -0.76
PRPF40B-202ENST00000380281 DUX4L9Q6RFH8 374 aaPredicted RBP10.31□□□□□ -0.76
PRPF40B-202ENST00000380281 NEUROG1Q92886 237 aa10.31□□□□□ -0.76
PRPF40B-202ENST00000380281 CSMD1Q96PZ7 3565 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 K7ERU9 68 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 FOXH1O75593 365 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 CA2P00918 260 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 CYC1P08574 325 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 IGLL1P15814 213 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 ACSF3Q4G176 576 aaPredicted RBP10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 STUMQ69YW2 141 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 TMEM108Q6UXF1 575 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 OR8I2Q8N0Y5 310 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 OTOGLQ3ZCN5 2332 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 TAX1BP3O14907 124 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 PRRX1P54821 245 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 Q0VG73 95 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 MLANAQ16655 118 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 NHLRC2Q8NBF2 726 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 BORCS7Q96B45 105 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 KCNS1Q96KK3 526 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 ZNF324O75467 553 aaPredicted RBP10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 OR10J4P0C629 311 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 HTD2P86397 168 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 WDR82Q6UXN9 313 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 MOB1BQ7L9L4 216 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 FAM216AQ8WUB2 273 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 MS4A5Q9H3V2 200 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 RELNP78509 3460 aa10.3□□□□□ -0.76
PRPF40B-202ENST00000380281 OOEPA6NGQ2 149 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 C15orf62A8K5M9 175 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 SRIP30626 198 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 ERVK11-1P61568 191 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 RHOGP84095 191 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 FXYD3Q14802 87 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 CD177Q8N6Q3 437 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 RND1Q92730 232 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 MAP1AP78559 2803 aaPredicted RBP10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 TLN1Q9Y490 2541 aaKnown RBP10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 SPINT2O43291 252 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 PROP1O75360 226 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 NUDT3O95989 172 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 OR4P4Q8NGL7 312 aa10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 SNRNP40Q96DI7 357 aaKnown RBP10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
PRPF40B-202ENST00000380281 MUC21A0A0G2JKD1 596 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 MUC21A0A140T8X8 626 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 TMPRSS2O15393 492 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 NRN1LQ496H8 165 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 MUC21Q5SSG8 566 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 ACP7Q6ZNF0 438 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 ZCCHC24Q8N2G6 241 aaKnown RBP10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 MUC15Q8N387 334 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 SMIM12Q96EX1 92 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 SGK494Q96LW2 274 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 GP6Q9HCN6 339 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 SERTAD4Q9NUC0 356 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 COL6A6A6NMZ7 2263 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 K7EN84 100 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 SS18L1O75177 396 aaPredicted RBP10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 CLDN14O95500 239 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 CECR9P0C854 216 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 APELAP0DMC3 54 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 PRDX2P32119 198 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 ZNF134P52741 427 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 PRB3Q04118 309 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms