RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 OR1L4Q8NGR5 311 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 SMCO4Q9NRQ5 59 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 EXPH5Q8NEV8 1989 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 IGLV3-9A0A075B6K5 115 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 TGIF2-C20orf24A0A0A6YYL0 155 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A10PA6NDY2 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A18PA6NE21 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A16PA6NEW6 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A20PA6NIJ5 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A8PA6NJQ4 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A7PA6NKC0 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A22PA8MWA6 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A12PA8MX19 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A5PA8MXJ8 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A23PA8MXZ1 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 GNG7O60262 68 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FOXH1O75593 365 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 KBTBD11O94819 623 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A15PP0C7V4 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A13PP0C7W8 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A14PP0C7W9 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM90A24PP0C7X0 464 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 MPZP25189 248 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF137PP52743 207 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 IGFL3Q6UXB1 125 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 C1orf229Q6ZS94 237 aaPredicted RBP6.63□□□□□ -1.35
CKAP2-203ENST00000378037 MIR17HGQ75NE6 70 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 CMTM2Q8TAZ6 248 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 C5orf30Q96GV9 206 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 IFI27L2Q9H2X8 130 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 HIF1ANQ9NWT6 349 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 JPT1Q9UK76 154 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 SOX21Q9Y651 276 aaPredicted RBP6.63□□□□□ -1.35
CKAP2-203ENST00000378037 MDFIC2A0A1B0GVS7 189 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 SLC17A3O00476 420 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FGF2P09038 288 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 HOXB1P14653 301 aaPredicted RBP6.63□□□□□ -1.35
CKAP2-203ENST00000378037 HLA-GP17693 338 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 ADCYAP1P18509 176 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 CRYBB3P26998 211 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 ERVK11-1P61568 191 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 ADORA2A-AS1P86434 159 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 ID3Q02535 119 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 DAZAP2Q15038 168 aaPredicted RBP6.63□□□□□ -1.35
CKAP2-203ENST00000378037 TEPPQ6URK8 271 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 CCL19Q99731 98 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF430Q9H8G1 570 aaPredicted RBP6.63□□□□□ -1.35
CKAP2-203ENST00000378037 SEPSECSQ9HD40 501 aaKnown RBP6.63□□□□□ -1.35
CKAP2-203ENST00000378037 KPTNQ9Y664 436 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FOXI3A8MTJ6 420 aaPredicted RBP6.62□□□□□ -1.35
CKAP2-203ENST00000378037 SLC25A5P05141 298 aaKnown RBP6.62□□□□□ -1.35
CKAP2-203ENST00000378037 HSPE1P61604 102 aaKnown RBP6.62□□□□□ -1.35
CKAP2-203ENST00000378037 HMGN3Q15651 99 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 MBNL2Q5VZF2 373 aaKnown RBP6.62□□□□□ -1.35
CKAP2-203ENST00000378037 TRAT1Q6PIZ9 186 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 IGFL2Q6UWQ7 119 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 SSX7Q7RTT5 188 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 LINC00596Q86U02 117 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 RPP25LQ8N5L8 163 aaKnown RBP6.62□□□□□ -1.35
CKAP2-203ENST00000378037 STPG3Q8N7X2 389 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 OR5AU1Q8NGC0 362 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 OR1L8Q8NGR8 309 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 LINC00479Q96M42 142 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 TMEM56Q96MV1 263 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 PLA2G2EQ9NZK7 142 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 NAGKQ9UJ70 344 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 STAB1Q9NY15 2570 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 PITX3O75364 302 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 IGLV1-44P01699 117 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 ACAA1P09110 424 aaPredicted RBP6.62□□□□□ -1.35
CKAP2-203ENST00000378037 UCP3P55916 312 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 GNG5P63218 68 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 BATFQ16520 125 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 NPCDR1Q9BY65 106 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 WDR61Q9GZS3 305 aaKnown RBP6.62□□□□□ -1.35
CKAP2-203ENST00000378037 ELOVL5Q9NYP7 299 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 FOXA2Q9Y261 457 aaPredicted RBP6.62□□□□□ -1.35
CKAP2-203ENST00000378037 TMEM56-RWDD3S4R434 201 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 NOTCH1P46531 2555 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 CSN3P07498 182 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 SEC11BP0C7V7 166 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 DANCRP0C864 163 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 CT45A6P0DMU7 189 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 CT45A5P0DMU8 189 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 CT45A7P0DMV0 189 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 PF4V1P10720 104 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 PPOXP50336 477 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 CLEC2AQ6UVW9 174 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 HSD17B13Q7Z5P4 300 aaPredicted RBP6.62□□□□□ -1.35
CKAP2-203ENST00000378037 GBGT1Q8N5D6 347 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 DIRC2Q96SL1 478 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 CLEC7AQ9BXN2 247 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 C7orf69Q9H7B7 122 aa6.62□□□□□ -1.35
CKAP2-203ENST00000378037 PRSS47A8MTI9 375 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 SHISA9B4DS77 424 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 C22orf46C9J442 243 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 IFNL4K9M1U5 179 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 NDUFA2O43678 99 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 BPIFB3P59826 476 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 UBE2G1P62253 170 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms