RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 IL17DQ8TAD2 202 aa14.36□□□□□ -0.11
CBWD3-204ENST00000377349 MRGPRFQ96AM1 343 aa14.36□□□□□ -0.11
CBWD3-204ENST00000377349 TMEM56Q96MV1 263 aa14.36□□□□□ -0.11
CBWD3-204ENST00000377349 NDUFA4L2Q9NRX3 87 aa14.36□□□□□ -0.11
CBWD3-204ENST00000377349 IGHV3OR16-8A0A075B7F1 116 aa14.35□□□□□ -0.11
CBWD3-204ENST00000377349 TGOLN2O43493 480 aa14.35□□□□□ -0.11
CBWD3-204ENST00000377349 ZNF182P17025 639 aaPredicted RBP14.35□□□□□ -0.11
CBWD3-204ENST00000377349 PTBP1P26599 531 aaKnown RBP eCLIP14.35□□□□□ -0.11
CBWD3-204ENST00000377349 SLC16A13Q7RTY0 426 aa14.35□□□□□ -0.11
CBWD3-204ENST00000377349 HSD17B13Q7Z5P4 300 aaPredicted RBP14.35□□□□□ -0.11
CBWD3-204ENST00000377349 GPR141Q7Z602 305 aa14.35□□□□□ -0.11
CBWD3-204ENST00000377349 OR52B4Q8NGK2 314 aa14.35□□□□□ -0.11
CBWD3-204ENST00000377349 OR52I2Q8NH67 350 aa14.35□□□□□ -0.11
CBWD3-204ENST00000377349 TSC22D3Q99576 134 aa14.35□□□□□ -0.11
CBWD3-204ENST00000377349 C20orf24Q9BUV8 137 aa14.35□□□□□ -0.11
CBWD3-204ENST00000377349 KLK11Q9UBX7 282 aa14.35□□□□□ -0.11
CBWD3-204ENST00000377349 F11RQ9Y624 299 aaKnown RBP14.35□□□□□ -0.11
CBWD3-204ENST00000377349 DBX1A6NMT0 343 aa14.34□□□□□ -0.11
CBWD3-204ENST00000377349 C15orf61A6NNL5 157 aa14.34□□□□□ -0.11
CBWD3-204ENST00000377349 A8MWP6 167 aa14.34□□□□□ -0.11
CBWD3-204ENST00000377349 KLK9Q2XQG4 91 aa14.34□□□□□ -0.11
CBWD3-204ENST00000377349 RBPMS2Q6ZRY4 209 aaKnown RBP14.34□□□□□ -0.11
CBWD3-204ENST00000377349 VN1R17PQ8TDU5 208 aa14.34□□□□□ -0.11
CBWD3-204ENST00000377349 MISP3Q96FF7 219 aa14.34□□□□□ -0.11
CBWD3-204ENST00000377349 FKBP11Q9NYL4 201 aa14.34□□□□□ -0.11
CBWD3-204ENST00000377349 C21orf62Q9NYP8 219 aa14.34□□□□□ -0.11
CBWD3-204ENST00000377349 KLK9Q9UKQ9 250 aa14.34□□□□□ -0.11
CBWD3-204ENST00000377349 UFC1Q9Y3C8 167 aa14.34□□□□□ -0.11
CBWD3-204ENST00000377349 CD3DP04234 171 aa14.33□□□□□ -0.11
CBWD3-204ENST00000377349 FGF2P09038 288 aa14.33□□□□□ -0.11
CBWD3-204ENST00000377349 MFAP2P55001 183 aa14.33□□□□□ -0.11
CBWD3-204ENST00000377349 SCGB2B2Q4G0G5 96 aa14.33□□□□□ -0.11
CBWD3-204ENST00000377349 SPINK9Q5DT21 86 aa14.33□□□□□ -0.11
CBWD3-204ENST00000377349 MRPS26Q9BYN8 205 aaKnown RBP14.33□□□□□ -0.11
CBWD3-204ENST00000377349 ZNF207O43670 478 aaKnown RBP14.32□□□□□ -0.12
CBWD3-204ENST00000377349 OR5B3Q8NH48 314 aa14.32□□□□□ -0.12
CBWD3-204ENST00000377349 TMEM14BQ9NUH8 114 aa14.32□□□□□ -0.12
CBWD3-204ENST00000377349 DNAH10Q8IVF4 4471 aa14.32□□□□□ -0.12
CBWD3-204ENST00000377349 AKR1C2P52895 323 aa14.32□□□□□ -0.12
CBWD3-204ENST00000377349 PIGPP57054 158 aa14.32□□□□□ -0.12
CBWD3-204ENST00000377349 IZUMO4Q1ZYL8 232 aa14.32□□□□□ -0.12
CBWD3-204ENST00000377349 SCARB1Q8WTV0 552 aa14.32□□□□□ -0.12
CBWD3-204ENST00000377349 PINX1Q96BK5 328 aaKnown RBP14.32□□□□□ -0.12
CBWD3-204ENST00000377349 BSCL2Q96G97 398 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-204ENST00000377349 SEC22AQ96IW7 307 aa14.32□□□□□ -0.12
CBWD3-204ENST00000377349 IGKV1-39P01597 117 aa14.31□□□□□ -0.12
CBWD3-204ENST00000377349 IGHV3-48P01763 117 aa14.31□□□□□ -0.12
CBWD3-204ENST00000377349 IGKV1D-39P04432 117 aa14.31□□□□□ -0.12
CBWD3-204ENST00000377349 UCP3P55916 312 aa14.31□□□□□ -0.12
CBWD3-204ENST00000377349 TRIM16LQ309B1 348 aa14.31□□□□□ -0.12
CBWD3-204ENST00000377349 CLVS1Q8IUQ0 354 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-204ENST00000377349 OR4D10Q8NGI6 311 aa14.31□□□□□ -0.12
CBWD3-204ENST00000377349 RNASE11Q8TAA1 199 aaKnown RBP14.31□□□□□ -0.12
CBWD3-204ENST00000377349 TMEM190Q8WZ59 177 aa14.31□□□□□ -0.12
CBWD3-204ENST00000377349 MARC2Q969Z3 335 aa14.31□□□□□ -0.12
CBWD3-204ENST00000377349 CHRDL1Q9BU40 450 aa14.31□□□□□ -0.12
CBWD3-204ENST00000377349 SPCS2Q15005 226 aa14.3□□□□□ -0.12
CBWD3-204ENST00000377349 OR1L6Q8NGR2 347 aa14.3□□□□□ -0.12
CBWD3-204ENST00000377349 ABHD1Q96SE0 405 aa14.3□□□□□ -0.12
CBWD3-204ENST00000377349 OVOL2Q9BRP0 275 aa14.3□□□□□ -0.12
CBWD3-204ENST00000377349 MRPL27Q9P0M9 148 aaKnown RBP14.3□□□□□ -0.12
CBWD3-204ENST00000377349 COPZ2Q9P299 210 aa14.3□□□□□ -0.12
CBWD3-204ENST00000377349 K7EIM0 57 aa14.29□□□□□ -0.12
CBWD3-204ENST00000377349 YIF1AO95070 293 aa14.29□□□□□ -0.12
CBWD3-204ENST00000377349 RAB3DO95716 219 aa14.29□□□□□ -0.12
CBWD3-204ENST00000377349 ANKRD55Q3KP44 614 aa14.29□□□□□ -0.12
CBWD3-204ENST00000377349 FAAP20Q6NZ36 180 aa14.29□□□□□ -0.12
CBWD3-204ENST00000377349 TP53RKQ96S44 253 aa14.29□□□□□ -0.12
CBWD3-204ENST00000377349 ZNF436Q9C0F3 470 aaPredicted RBP14.29□□□□□ -0.12
CBWD3-204ENST00000377349 DAZ1Q9NQZ3 744 aaKnown RBP14.29□□□□□ -0.12
CBWD3-204ENST00000377349 MTFP1Q9UDX5 166 aa14.29□□□□□ -0.12
CBWD3-204ENST00000377349 UBQLN2Q9UHD9 624 aa14.29□□□□□ -0.12
CBWD3-204ENST00000377349 TAS2R19P59542 299 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 PRCDQ00LT1 54 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 SP6Q3SY56 376 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 SPSB3Q6PJ21 355 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 ARRDC1Q8N5I2 433 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 SLC35G3Q8N808 338 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 OR1P1Q8NH06 330 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 C15orf40Q8WUR7 153 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 LINC00476Q8WZB0 136 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 PDCD10Q9BUL8 212 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 MIXL1Q9H2W2 232 aa14.28□□□□□ -0.12
CBWD3-204ENST00000377349 FAM212BQ9NTI7 297 aaPredicted RBP14.28□□□□□ -0.12
CBWD3-204ENST00000377349 IGHV3-49A0A0A0MS15 119 aa14.27□□□□□ -0.12
CBWD3-204ENST00000377349 C3orf85A0A1B0GTC6 90 aa14.27□□□□□ -0.12
CBWD3-204ENST00000377349 CTDSP2O14595 271 aa14.27□□□□□ -0.12
CBWD3-204ENST00000377349 IFNA17P01571 189 aa14.27□□□□□ -0.12
CBWD3-204ENST00000377349 TBPP20226 339 aa14.27□□□□□ -0.12
CBWD3-204ENST00000377349 ELLP55199 621 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-204ENST00000377349 ERHP84090 104 aaKnown RBP14.27□□□□□ -0.12
CBWD3-204ENST00000377349 CCDC71LQ8N9Z2 235 aa14.27□□□□□ -0.12
CBWD3-204ENST00000377349 OR13C8Q8NGS7 320 aa14.27□□□□□ -0.12
CBWD3-204ENST00000377349 MARCH1Q8TCQ1 289 aa14.27□□□□□ -0.12
CBWD3-204ENST00000377349 ZNF486Q96H40 463 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-204ENST00000377349 GGTLC1Q9BX51 225 aa14.27□□□□□ -0.12
CBWD3-204ENST00000377349 NDUFA4O00483 81 aa14.26□□□□□ -0.13
CBWD3-204ENST00000377349 NUPL2O15504 423 aaKnown RBP14.26□□□□□ -0.13
CBWD3-204ENST00000377349 MT-CO2P00403 227 aa14.26□□□□□ -0.13
CBWD3-204ENST00000377349 C8orf88P0DMB2 117 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms