RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 GNB4Q9HAV0 340 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 EDA2RQ9HAV5 297 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 NUDT15Q9NV35 164 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 A0A0B4J2A0 478 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 C15orf61A6NNL5 157 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 A8MZ25 164 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 SNAPC5O75971 98 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 ATG12O94817 140 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 APELAP0DMC3 54 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 RAB9AP51151 201 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 LYG2Q86SG7 212 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 SLC35G3Q8N808 338 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 OR5T1Q8NG75 326 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 OR52B4Q8NGK2 314 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 OR4A16Q8NH70 328 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 LSM10Q969L4 123 aaKnown RBP9.34□□□□□ -0.91
LSM2-208ENST00000375661 RRNAD1Q96FB5 475 aaKnown RBP9.34□□□□□ -0.91
LSM2-208ENST00000375661 TMEM68Q96MH6 324 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 FYTTD1Q96QD9 318 aaKnown RBP9.34□□□□□ -0.91
LSM2-208ENST00000375661 PHB2Q99623 299 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 KLK15Q9H2R5 256 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 TMEM14BQ9NUH8 114 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 GAR1Q9NY12 217 aaKnown RBP9.34□□□□□ -0.91
LSM2-208ENST00000375661 SHPKQ9UHJ6 478 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 PRNDQ9UKY0 176 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 FOXA2Q9Y261 457 aaPredicted RBP9.34□□□□□ -0.91
LSM2-208ENST00000375661 OR51B2Q9Y5P1 312 aa9.34□□□□□ -0.91
LSM2-208ENST00000375661 EPPK1P58107 5090 aaKnown RBP9.34□□□□□ -0.91
LSM2-208ENST00000375661 A0A1W2PN81 502 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 HLA-AP01891 365 aaKnown RBP9.33□□□□□ -0.92
LSM2-208ENST00000375661 CHRNA7P36544 502 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 SRPXP78539 464 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 C4orf46Q504U0 113 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 NMSQ5H8A3 153 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 ZFAND6Q6FIF0 208 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 ACSM6Q6P461 480 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 FAM219AQ8IW50 185 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 OR1L8Q8NGR8 309 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 SPIN2AQ99865 258 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 SPIN2BQ9BPZ2 258 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 QTRT1Q9BXR0 403 aaKnown RBP9.33□□□□□ -0.92
LSM2-208ENST00000375661 COMMD5Q9GZQ3 224 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 NDUFA4L2Q9NRX3 87 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 SACSQ9NZJ4 4579 aa9.33□□□□□ -0.92
LSM2-208ENST00000375661 IGLC7A0M8Q6 106 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 LINC01619G3V211 115 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 TRAPPC2P0DI81 140 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 TRAPPC2BP0DI82 140 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 AREGP15514 252 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 HSPE1P61604 102 aaKnown RBP9.32□□□□□ -0.92
LSM2-208ENST00000375661 AARDQ4LEZ3 155 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 TTC9CQ8N5M4 171 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 OR10W1Q8NGF6 305 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 OR5B3Q8NH48 314 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 RNASE11Q8TAA1 199 aaKnown RBP9.32□□□□□ -0.92
LSM2-208ENST00000375661 DLX4Q92988 240 aaPredicted RBP9.32□□□□□ -0.92
LSM2-208ENST00000375661 SEC22CQ9BRL7 303 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 FKBP11Q9NYL4 201 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 CSMD3Q7Z407 3707 aa9.32□□□□□ -0.92
LSM2-208ENST00000375661 DUXBA0A1W2PPF3 345 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 INMT-MINDY4F8WBC2 141 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 ST8SIA3O43173 380 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 BRI3O95415 125 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 IL5P05113 134 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 CRYGCP07315 174 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 HOXB5P09067 269 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 LGALS1P09382 135 aaKnown RBP9.31□□□□□ -0.92
LSM2-208ENST00000375661 WT1-ASQ06250 92 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 PLET1Q6UQ28 207 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 C19orf35Q6ZS72 473 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 COQ8AQ8NI60 647 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 MITD1Q8WV92 249 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 MS4A10Q96PG2 267 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 OR5B12Q96R08 314 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 SRSF8Q9BRL6 282 aaKnown RBP9.31□□□□□ -0.92
LSM2-208ENST00000375661 MARVELD1Q9BSK0 173 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 HINT2Q9BX68 163 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 C19orf73Q9NVV2 129 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 CACNG5Q9UF02 275 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 ZNF257Q9Y2Q1 563 aa9.31□□□□□ -0.92
LSM2-208ENST00000375661 DNAH1Q9P2D7 4330 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 NPIPB5A8MRT5 1133 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 RBMXL2O75526 392 aaKnown RBP9.3□□□□□ -0.92
LSM2-208ENST00000375661 ADAP1O75689 374 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 JTBO76095 146 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 REG1AP05451 166 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 IGHV4-30-4P0DP06 118 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 CTRB1P17538 263 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 PSMB6P28072 239 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 SLURP1P55000 103 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 PRCDQ00LT1 54 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 GGNBP1Q5YKI7 109 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 CTRB2Q6GPI1 263 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 THOC7Q6I9Y2 204 aaKnown RBP9.3□□□□□ -0.92
LSM2-208ENST00000375661 ZNF431Q8TF32 576 aaPredicted RBP9.3□□□□□ -0.92
LSM2-208ENST00000375661 OR4C12Q96R67 309 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 SPATA25Q9BR10 227 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.3□□□□□ -0.92
LSM2-208ENST00000375661 TMED3Q9Y3Q3 217 aa9.3□□□□□ -0.92
LSM2-208ENST00000375661 STARD9Q9P2P6 4700 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms