RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 APOBEC4Q8WW27 367 aaKnown RBP16.74■□□□□ 0.27
COL15A1-201ENST00000375001 PTGDSP41222 190 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 IL9P15248 144 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 IGHV3-66A0A0C4DH42 116 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 HSD52Q0P140 79 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 TMEM74BQ9NUR3 256 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 S4R3C0 116 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 RBMY1BA6NDE4 496 aaKnown RBP16.73■□□□□ 0.27
COL15A1-201ENST00000375001 RBMY1EA6NEQ0 496 aaKnown RBP16.73■□□□□ 0.27
COL15A1-201ENST00000375001 RBMY1DP0C7P1 496 aaKnown RBP16.73■□□□□ 0.27
COL15A1-201ENST00000375001 RBMY1A1P0DJD3 496 aaKnown RBP16.73■□□□□ 0.27
COL15A1-201ENST00000375001 RBMY1CP0DJD4 496 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 ATP5G2Q06055 141 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 DCAF10Q5QP82 559 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 DPH3Q96FX2 82 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 TRAV2A0A0B4J234 112 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 DPM2O94777 84 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 ATP5IP56385 69 aaPredicted RBP16.73■□□□□ 0.27
COL15A1-201ENST00000375001 CCL20P78556 96 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 TMEM101Q96IK0 257 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 DNM1P46Q6ZS02 220 aa16.73■□□□□ 0.27
COL15A1-201ENST00000375001 HBDP02042 147 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 RSPO4Q2I0M5 234 aaPredicted RBP16.72■□□□□ 0.27
COL15A1-201ENST00000375001 Q6AWC8 147 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 DIRC2Q96SL1 478 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 IGKV3D-20A0A0C4DH25 116 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 H7C1H1 209 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 CIARTQ8N365 385 aaPredicted RBP16.72■□□□□ 0.27
COL15A1-201ENST00000375001 ST20Q9HBF5 79 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 MYOFQ9NZM1 2061 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 SHANK3Q9BYB0 1731 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 NPIPB11E5RHQ5 1161 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 FGF16O43320 207 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 FAM214BQ7L5A3 538 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 GDF15Q99988 308 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 C17orf98A8MV24 154 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 SAA1P0DJI8 122 aaPredicted RBP16.72■□□□□ 0.27
COL15A1-201ENST00000375001 WBP1LQ9NX94 342 aa16.72■□□□□ 0.27
COL15A1-201ENST00000375001 C1orf194Q5T5A4 169 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 OR9G1Q8NH87 305 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 A0A1B0GTI1 187 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 IGHV3-23P01764 117 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 IFI6P09912 130 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 GZMBP10144 247 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 LY6G6FQ5SQ64 297 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 DICER1Q9UPY3 1922 aaKnown RBP16.71■□□□□ 0.27
COL15A1-201ENST00000375001 PATE3B3GLJ2 98 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 TMEM155Q4W5P6 130 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 SP7Q8TDD2 431 aaPredicted RBP16.71■□□□□ 0.27
COL15A1-201ENST00000375001 TMEM186Q96B77 213 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 SVILO95425 2214 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 A0A0G2JLM5 398 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 SLC25A15Q9Y619 301 aa16.71■□□□□ 0.27
COL15A1-201ENST00000375001 C9orf172C9J069 976 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 NAPSAO96009 420 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 GNG5P63218 68 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 OCIAD2Q56VL3 154 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 OR10J3Q5JRS4 329 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 TRAV8-1A0A0A6YYK1 113 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 KLF14Q8TD94 323 aaPredicted RBP16.7■□□□□ 0.26
COL15A1-201ENST00000375001 DUX5Q96PT3 197 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 CITED1Q99966 193 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 SBF2Q86WG5 1849 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 ZNF815PA8K554 130 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 TMEM249Q2WGJ8 235 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 OR10W1Q8NGF6 305 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 Q9H3A6 140 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 THSD7AQ9UPZ6 1657 aa16.7■□□□□ 0.26
COL15A1-201ENST00000375001 TRIP6Q15654 476 aaKnown RBP16.69■□□□□ 0.26
COL15A1-201ENST00000375001 PYY3Q5JQD4 70 aa16.69■□□□□ 0.26
COL15A1-201ENST00000375001 C21orf140B9A014 251 aa16.69■□□□□ 0.26
COL15A1-201ENST00000375001 F8VVB4 439 aa16.69■□□□□ 0.26
COL15A1-201ENST00000375001 F8VWA3 439 aa16.69■□□□□ 0.26
COL15A1-201ENST00000375001 H0YIZ8 118 aa16.69■□□□□ 0.26
COL15A1-201ENST00000375001 OCC1Q8TAD7 63 aa16.69■□□□□ 0.26
COL15A1-201ENST00000375001 MDC1Q14676 2089 aaKnown RBP16.69■□□□□ 0.26
COL15A1-201ENST00000375001 TRAV5A0A0B4J249 113 aa16.69■□□□□ 0.26
COL15A1-201ENST00000375001 KBTBD11-OT1A0A1B0GTJ5 212 aa16.69■□□□□ 0.26
COL15A1-201ENST00000375001 ZNF646O15015 1829 aaPredicted RBP16.69■□□□□ 0.26
COL15A1-201ENST00000375001 OTOFQ9HC10 1997 aa16.69■□□□□ 0.26
COL15A1-201ENST00000375001 CRIM1Q9NZV1 1036 aa16.69■□□□□ 0.26
COL15A1-201ENST00000375001 PPIAL4CA0A0B4J2A2 164 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 PPIAL4GP0DN37 164 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 C1orf210Q8IVY1 113 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 ESDP10768 282 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 SNRPD3P62318 126 aaKnown RBP16.68■□□□□ 0.26
COL15A1-201ENST00000375001 GNB1LQ9BYB4 327 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 FOXA2Q9Y261 457 aaPredicted RBP16.68■□□□□ 0.26
COL15A1-201ENST00000375001 FAM71F2Q6NXP2 309 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 EEF1AKMT3Q96AZ1 226 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 LTBP4Q8N2S1 1624 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 C12orf77C9JDV5 145 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 UBE2V1Q13404 147 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 ARID2Q68CP9 1835 aa16.68■□□□□ 0.26
COL15A1-201ENST00000375001 IGKCP01834 107 aa16.67■□□□□ 0.26
COL15A1-201ENST00000375001 PNKDQ8N490 385 aa16.67■□□□□ 0.26
COL15A1-201ENST00000375001 ZNRF1Q8ND25 227 aa16.67■□□□□ 0.26
COL15A1-201ENST00000375001 PRR7Q8TB68 274 aa16.67■□□□□ 0.26
COL15A1-201ENST00000375001 A0A1W2PRE2 83 aa16.67■□□□□ 0.26
COL15A1-201ENST00000375001 LOXL4Q96JB6 756 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms