RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 FOXF2Q12947 444 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 TMEM133Q9H2Q1 129 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 GPR61Q9BZJ8 451 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 DOCK6Q96HP0 2047 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 TRBV20OR9-2A0A075B6H5 130 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 CBLN1P23435 193 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 UQCRFS1P47985 274 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 PRB3Q04118 309 aaPredicted RBP16.43■□□□□ 0.22
LMO4-202ENST00000370544 APC2O95996 2303 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 SRP19P09132 144 aaKnown RBP16.43■□□□□ 0.22
LMO4-202ENST00000370544 CDX1P47902 265 aaPredicted RBP16.43■□□□□ 0.22
LMO4-202ENST00000370544 SPTA1P02549 2419 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 C15orf61A6NNL5 157 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 ATP5G3P48201 142 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 NABP1Q96AH0 204 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 TGFAP01135 160 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 GATA2P23769 480 aaPredicted RBP16.43■□□□□ 0.22
LMO4-202ENST00000370544 GAS1P54826 345 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 DNLZQ5SXM8 178 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 KIR2DL4Q99706 377 aa16.43■□□□□ 0.22
LMO4-202ENST00000370544 CARHSP1Q9Y2V2 147 aaKnown RBP16.43■□□□□ 0.22
LMO4-202ENST00000370544 FAM186AA6NE01 2351 aa16.42■□□□□ 0.22
LMO4-202ENST00000370544 THBDP07204 575 aa16.42■□□□□ 0.22
LMO4-202ENST00000370544 PRSS8Q16651 343 aa16.42■□□□□ 0.22
LMO4-202ENST00000370544 FMC1Q96HJ9 113 aa16.42■□□□□ 0.22
LMO4-202ENST00000370544 HINT1P49773 126 aaPredicted RBP16.42■□□□□ 0.22
LMO4-202ENST00000370544 NUP37Q8NFH4 326 aa16.42■□□□□ 0.22
LMO4-202ENST00000370544 OR4D5Q8NGN0 318 aa16.42■□□□□ 0.22
LMO4-202ENST00000370544 RAMP3O60896 148 aa16.42■□□□□ 0.22
LMO4-202ENST00000370544 WFIKKN1Q96NZ8 548 aa16.42■□□□□ 0.22
LMO4-202ENST00000370544 FOXG1P55316 489 aaPredicted RBP16.42■□□□□ 0.22
LMO4-202ENST00000370544 IL36BQ9NZH7 164 aa16.42■□□□□ 0.22
LMO4-202ENST00000370544 LGALS3P17931 250 aaKnown RBP16.41■□□□□ 0.22
LMO4-202ENST00000370544 BIVMQ86UB2 503 aa16.41■□□□□ 0.22
LMO4-202ENST00000370544 CEACAM4O75871 244 aa16.41■□□□□ 0.22
LMO4-202ENST00000370544 ZNF324BQ6AW86 544 aaPredicted RBP16.41■□□□□ 0.22
LMO4-202ENST00000370544 RNF126Q9BV68 326 aa16.41■□□□□ 0.22
LMO4-202ENST00000370544 IGHV1-46P01743 117 aa16.41■□□□□ 0.22
LMO4-202ENST00000370544 UQCR10Q9UDW1 63 aa16.41■□□□□ 0.22
LMO4-202ENST00000370544 LYNX1G3V0Z9 82 aa16.41■□□□□ 0.22
LMO4-202ENST00000370544 LYNX1P0DP58 116 aa16.41■□□□□ 0.22
LMO4-202ENST00000370544 Q0VFX4 171 aa16.41■□□□□ 0.22
LMO4-202ENST00000370544 IGHV3OR16-8A0A075B7F1 116 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 SLC17A3O00476 420 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 C9JCJ5 164 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 NAT1P18440 290 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 TBR1Q16650 682 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 H7C2G1 150 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 MPZP25189 248 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 TIMP3P35625 211 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 ASIPP42127 132 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 TMEM144Q7Z5S9 345 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 C7orf71A4D174 169 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 SMIM12Q96EX1 92 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 TMEM70Q9BUB7 260 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 LY6DQ14210 128 aa16.4■□□□□ 0.22
LMO4-202ENST00000370544 SLC25A34Q6PIV7 304 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 OR4X2Q8NGF9 303 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 PLSCR4Q9NRQ2 329 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 IGKV1D-8A0A087WSZ0 117 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 IGKV1-12A0A0C4DH73 117 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 IGKV1D-12P01611 117 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 NUTF2P61970 127 aaKnown RBP16.39■□□□□ 0.21
LMO4-202ENST00000370544 LY6G6FQ5SQ64 297 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 C12orf54Q6X4T0 127 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 COLCA1Q6ZS62 124 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 Q9H3A6 140 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 NPFFO15130 113 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 HIST1H4GQ99525 98 aa16.39■□□□□ 0.21
LMO4-202ENST00000370544 SIP14410 1827 aa16.38■□□□□ 0.21
LMO4-202ENST00000370544 M0R381 172 aa16.38■□□□□ 0.21
LMO4-202ENST00000370544 FOXA3P55318 350 aaPredicted RBP16.38■□□□□ 0.21
LMO4-202ENST00000370544 DMRTA2Q96SC8 542 aa16.38■□□□□ 0.21
LMO4-202ENST00000370544 IGHV3-11P01762 117 aa16.38■□□□□ 0.21
LMO4-202ENST00000370544 RPP21Q9H633 154 aaKnown RBP16.38■□□□□ 0.21
LMO4-202ENST00000370544 ANK1P16157 1881 aa16.38■□□□□ 0.21
LMO4-202ENST00000370544 ZDBF2Q9HCK1 2354 aa16.38■□□□□ 0.21
LMO4-202ENST00000370544 COX6CP09669 75 aa16.37■□□□□ 0.21
LMO4-202ENST00000370544 ADIPOQQ15848 244 aa16.37■□□□□ 0.21
LMO4-202ENST00000370544 MOB4Q9Y3A3 225 aa16.37■□□□□ 0.21
LMO4-202ENST00000370544 THSD7BQ9C0I4 1608 aa16.37■□□□□ 0.21
LMO4-202ENST00000370544 LRTM2Q8N967 370 aa16.37■□□□□ 0.21
LMO4-202ENST00000370544 DUTP33316 252 aaKnown RBP16.37■□□□□ 0.21
LMO4-202ENST00000370544 TMEM183AQ8IXX5 376 aa16.36■□□□□ 0.21
LMO4-202ENST00000370544 A8MXK9 166 aa16.36■□□□□ 0.21
LMO4-202ENST00000370544 PRELID3AQ96N28 172 aa16.36■□□□□ 0.21
LMO4-202ENST00000370544 ITLN2Q8WWU7 325 aaPredicted RBP16.36■□□□□ 0.21
LMO4-202ENST00000370544 KLHDC3Q9BQ90 382 aa16.36■□□□□ 0.21
LMO4-202ENST00000370544 LOC107984156A0A0G2JMH3 177 aa16.36■□□□□ 0.21
LMO4-202ENST00000370544 ARL17AQ8IVW1 177 aa16.36■□□□□ 0.21
LMO4-202ENST00000370544 OR9G9P0C7N8 305 aa16.36■□□□□ 0.21
LMO4-202ENST00000370544 CD24P25063 80 aa16.36■□□□□ 0.21
LMO4-202ENST00000370544 FAM131CQ96AQ9 280 aa16.36■□□□□ 0.21
LMO4-202ENST00000370544 IL18BPO95998 194 aa16.35■□□□□ 0.21
LMO4-202ENST00000370544 PAPPA-AS1Q5QFB9 102 aa16.35■□□□□ 0.21
LMO4-202ENST00000370544 ATOH7Q8N100 152 aa16.35■□□□□ 0.21
LMO4-202ENST00000370544 SDF2L1Q9HCN8 221 aa16.35■□□□□ 0.21
LMO4-202ENST00000370544 CIARTQ8N365 385 aaPredicted RBP16.35■□□□□ 0.21
LMO4-202ENST00000370544 IGKV3OR2-268A0A0C4DH90 116 aa16.35■□□□□ 0.21
LMO4-202ENST00000370544 FABP2P12104 132 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms