RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 MED13Q9UHV7 2174 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 PCSK5Q92824 1860 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 PRSS46E5RG02 174 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 AGFG2O95081 481 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 RHOBP62745 196 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 CX3CL1P78423 397 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 MLANAQ16655 118 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 ZNF766Q5HY98 468 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 DCAF12Q5T6F0 453 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 AMMECR1LQ6DCA0 310 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 C1orf229Q6ZS94 237 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-201ENST00000369407 TMEM140Q9NV12 185 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 ARFGEF3Q5TH69 2177 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 TRGV10A0A0A0MS01 117 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 IGHV2OR16-5A0A0B4J2B6 119 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 CYC1P08574 325 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 BORCS7Q96B45 105 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 NPVFQ9HCQ7 196 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 TCF19Q9Y242 345 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 TIMM8BQ9Y5J9 83 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-201ENST00000369407 A0A1W2PN81 502 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 OR2T8A6NH00 312 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 TSPOP30536 169 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 ZNF134P52741 427 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 PRRX1P54821 245 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 TMEM249Q2WGJ8 235 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 SLC35E4Q6ICL7 350 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 TEPPQ6URK8 271 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 C11orf53Q8IXP5 236 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 KIR3DL3Q8N743 410 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 SSBP4Q9BWG4 385 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-201ENST00000369407 WASHC3Q9Y3C0 194 aa10.13□□□□□ -0.79
PHGDH-201ENST00000369407 MPDU1O75352 247 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 FABP6P51161 128 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 PMCHL1Q16048 86 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 TNXAQ16473 311 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 TMEM105Q8N8V8 129 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 FAM173AQ9BQD7 235 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 SLC35D1Q9NTN3 355 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 CD24P25063 80 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 ERVK-16P61578 105 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 SGK494Q96LW2 274 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 LSM4Q9Y4Z0 139 aaKnown RBP10.12□□□□□ -0.79
PHGDH-201ENST00000369407 CFAP47Q6ZTR5 3102 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 BOD1L1Q8NFC6 3051 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 K7ERU9 68 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 APCSP02743 223 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 USF1P22415 310 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-201ENST00000369407 TIGITQ495A1 244 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 IBA57Q5T440 356 aaKnown RBP10.12□□□□□ -0.79
PHGDH-201ENST00000369407 ACP7Q6ZNF0 438 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 ZNF439Q8NDP4 499 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 KLF14Q8TD94 323 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-201ENST00000369407 CLCF1Q9UBD9 225 aa10.12□□□□□ -0.79
PHGDH-201ENST00000369407 IGHV3OR15-7A0A075B7D8 119 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 IGHV2-70DA0A0C4DH43 119 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 SH2D7A6NKC9 451 aaPredicted RBP10.11□□□□□ -0.79
PHGDH-201ENST00000369407 C9JCJ5 164 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 ARG2P78540 354 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 ABHD17BQ5VST6 288 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 STUMQ69YW2 141 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 FAM214BQ7L5A3 538 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 NAA38Q9BRA0 125 aaKnown RBP10.11□□□□□ -0.79
PHGDH-201ENST00000369407 PLEKHA3Q9HB20 300 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 B4GALT7Q9UBV7 327 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 SPINT2O43291 252 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 CAMPP49913 170 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 RPL8P62917 257 aaKnown RBP10.11□□□□□ -0.79
PHGDH-201ENST00000369407 RNASEKQ6P5S7 137 aaKnown RBP10.11□□□□□ -0.79
PHGDH-201ENST00000369407 SPATA12Q7Z6I5 190 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 CD177Q8N6Q3 437 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 TXNDC17Q9BRA2 123 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 CLEC5AQ9NY25 188 aa10.11□□□□□ -0.79
PHGDH-201ENST00000369407 TECRQ9NZ01 308 aaKnown RBP10.11□□□□□ -0.79
PHGDH-201ENST00000369407 TRAV9-1A0A075B6T8 112 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 TRAV5A0A0B4J249 113 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 PPBPP02775 128 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 AMY1AP04745 511 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 NPY1RP25929 384 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 OR10J3Q5JRS4 329 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 EBLN2Q6P2I7 272 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 C11orf52Q96A22 123 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 ZNF503Q96F45 646 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 ZNF355PQ9NSJ1 428 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 CADP27708 2225 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 H0Y8G0 127 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 MT-CO2P00403 227 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 SP1P08047 785 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 WDR82Q6UXN9 313 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 TDHQ8IZJ6 230 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 SLC24A4Q8NFF2 622 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 OR2D3Q8NGH3 330 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 C18orf32Q8TCD1 76 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 S1PR3Q99500 378 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 NABP2Q9BQ15 211 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 C15orf65H3BRN8 121 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 HSBP1O75506 76 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 CER1O95813 267 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 LINC00869P0C866 280 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms