RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 C4orf51C9J302 202 aa9.21□□□□□ -0.94
CLIP1-203ENST00000361654 CD7P09564 240 aa9.21□□□□□ -0.94
CLIP1-203ENST00000361654 FABP2P12104 132 aa9.21□□□□□ -0.94
CLIP1-203ENST00000361654 Q6AWC8 147 aa9.21□□□□□ -0.94
CLIP1-203ENST00000361654 C1QTNF4Q9BXJ3 329 aa9.21□□□□□ -0.94
CLIP1-203ENST00000361654 ATP5LO75964 103 aa9.21□□□□□ -0.94
CLIP1-203ENST00000361654 LINC00469Q8N7U9 141 aa9.21□□□□□ -0.94
CLIP1-203ENST00000361654 LINC01356Q8N9X3 169 aa9.21□□□□□ -0.94
CLIP1-203ENST00000361654 TRBV9A0A0B4J1U6 114 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 TRBV7-9A0A0J9YWB2 115 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 A0A1B0GW15 77 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 TMEM14DPA8MWL7 114 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 CCL3L1P16619 93 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 OR52E5Q8NH55 327 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 RGP1Q92546 391 aaPredicted RBP9.2□□□□□ -0.94
CLIP1-203ENST00000361654 DMRTA2Q96SC8 542 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 E9PQ18 207 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 HBBP68871 147 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 OR5AC2Q9NZP5 309 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 PTPRFP10586 1907 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 RRHO14718 337 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 FOLR2P14207 255 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 ZNF25P17030 456 aaPredicted RBP9.2□□□□□ -0.94
CLIP1-203ENST00000361654 NHLRC3Q5JS37 347 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 MINOS1Q5TGZ0 78 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 CHCHD5Q9BSY4 110 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 MINOS1-NBL1R4GNA1 71 aa9.2□□□□□ -0.94
CLIP1-203ENST00000361654 TRAV21A0A0B4J279 112 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 HLA-DQB1P01920 261 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 PAX8Q06710 450 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 JKAMPQ9P055 326 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 PAM16Q9Y3D7 125 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 ASPHD2Q6ICH7 369 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 VWCEQ96DN2 955 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 SCGB3A1Q96QR1 104 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 PSMG3Q9BT73 122 aaPredicted RBP9.19□□□□□ -0.94
CLIP1-203ENST00000361654 YPEL1O60688 119 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 RAMP1O60894 148 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 KLK2P20151 261 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 EGR4Q05215 589 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 ZNF585BQ52M93 769 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 FMC1Q96HJ9 113 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 YPEL2Q96QA6 119 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 CRIM1Q9NZV1 1036 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 LYNX1G3V0Z9 82 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 NDUFS8O00217 210 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 OVOL1O14753 267 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 LYNX1P0DP58 116 aa9.19□□□□□ -0.94
CLIP1-203ENST00000361654 MRPL18Q9H0U6 180 aaKnown RBP9.19□□□□□ -0.94
CLIP1-203ENST00000361654 TMEM187Q14656 261 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 TCF23Q7RTU1 214 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 PUSL1Q8N0Z8 303 aaKnown RBP9.18□□□□□ -0.94
CLIP1-203ENST00000361654 WNK3Q9BYP7 1800 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 LAMB2P55268 1798 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 CD8AP01732 235 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 CELA3BP08861 270 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 PLSCR2Q9NRY7 297 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 IGHV3OR16-8A0A075B7F1 116 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 H0YL77 283 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 GPHA2Q96T91 129 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 IGHV1-18A0A0C4DH31 117 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 FABP5P3A8MUU1 101 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 EREGO14944 169 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 HSPB9Q9BQS6 159 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 A0A087X0M5 115 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 A0A1B0GX30 115 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 PEX7O00628 323 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 TIMM23O14925 209 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 IFI27P40305 119 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-203ENST00000361654 ZNF660Q6AZW8 331 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-203ENST00000361654 WFIKKN1Q96NZ8 548 aa9.18□□□□□ -0.94
CLIP1-203ENST00000361654 UPK2O00526 184 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 AGAP20933 346 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 C2orf68Q2NKX9 166 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 PSMG4Q5JS54 123 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 LINC01590Q5TEZ4 76 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 ASCL4Q6XD76 172 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 CDK2AP2O75956 126 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 SAA1P0DJI8 122 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-203ENST00000361654 GATA3P23771 443 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 TEX38Q6PEX7 206 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 FER1L6-AS1Q8NA97 138 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 OR10S1Q8NGN2 331 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 PMCHL2Q9BQD1 86 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 PLSCR4Q9NRQ2 329 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 RND3P61587 244 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 OR10J3Q5JRS4 329 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 FAM71F2Q6NXP2 309 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 RNF125Q96EQ8 232 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 ST20Q9HBF5 79 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 SPRR3Q9UBC9 169 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 ZNF257Q9Y2Q1 563 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 DOPEY2Q9Y3R5 2298 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 A0A0G2JK05 382 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 A0A1B0GUT8 65 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 EGR1P18146 543 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 CENPWQ5EE01 88 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 TM2D1Q9BX74 207 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 VCX2Q9H322 139 aa9.17□□□□□ -0.94
CLIP1-203ENST00000361654 BEX4Q9NWD9 120 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms