RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 PRB3Q04118 309 aaPredicted RBP16.73■□□□□ 0.27
COL13A1-202ENST00000357811 TMEM14BQ9NUH8 114 aa16.73■□□□□ 0.27
COL13A1-202ENST00000357811 AARDQ4LEZ3 155 aa16.73■□□□□ 0.27
COL13A1-202ENST00000357811 TIMM23BQ5SRD1 257 aa16.73■□□□□ 0.27
COL13A1-202ENST00000357811 TMEM144Q7Z5S9 345 aa16.73■□□□□ 0.27
COL13A1-202ENST00000357811 PLEKHA3Q9HB20 300 aa16.73■□□□□ 0.27
COL13A1-202ENST00000357811 RAI1Q7Z5J4 1906 aaPredicted RBP16.73■□□□□ 0.27
COL13A1-202ENST00000357811 MBD3L4A6NDZ8 208 aaPredicted RBP16.72■□□□□ 0.27
COL13A1-202ENST00000357811 MBD3L3A6NE82 208 aaPredicted RBP16.72■□□□□ 0.27
COL13A1-202ENST00000357811 MBD3L5A6NJ08 208 aaPredicted RBP16.72■□□□□ 0.27
COL13A1-202ENST00000357811 TYMSP04818 313 aa16.72■□□□□ 0.27
COL13A1-202ENST00000357811 PAX1P15863 534 aa16.72■□□□□ 0.27
COL13A1-202ENST00000357811 RAB7AP51149 207 aa16.72■□□□□ 0.27
COL13A1-202ENST00000357811 ERVFC1-1P60608 527 aa16.72■□□□□ 0.27
COL13A1-202ENST00000357811 NHLRC2Q8NBF2 726 aa16.72■□□□□ 0.27
COL13A1-202ENST00000357811 MBD3L2Q8NHZ7 208 aaPredicted RBP16.72■□□□□ 0.27
COL13A1-202ENST00000357811 GAFA1Q96PS6 74 aa16.72■□□□□ 0.27
COL13A1-202ENST00000357811 SLC35D1Q9NTN3 355 aa16.72■□□□□ 0.27
COL13A1-202ENST00000357811 TANC2Q9HCD6 1990 aa16.72■□□□□ 0.27
COL13A1-202ENST00000357811 OR10J1P30954 320 aa16.72■□□□□ 0.27
COL13A1-202ENST00000357811 COA6Q5JTJ3 125 aaKnown RBP16.72■□□□□ 0.27
COL13A1-202ENST00000357811 LHFPL4Q7Z7J7 247 aa16.72■□□□□ 0.27
COL13A1-202ENST00000357811 F2Z2F3 143 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 CT45A6P0DMU7 189 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 CT45A5P0DMU8 189 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 CT45A7P0DMV0 189 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 IER3P46695 156 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 PAX5Q02548 391 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 RAB31Q13636 194 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 GBGT1Q8N5D6 347 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 RNASE7Q9H1E1 156 aaKnown RBP16.71■□□□□ 0.27
COL13A1-202ENST00000357811 ZZEF1O43149 2961 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 A6NNC1 897 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 LCN2P80188 198 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 PIP4P1Q86T03 277 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 NABP2Q9BQ15 211 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 TUBG2Q9NRH3 451 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 SVEP1Q4LDE5 3571 aa16.71■□□□□ 0.27
COL13A1-202ENST00000357811 CHRNB4P30926 498 aa16.71■□□□□ 0.26
COL13A1-202ENST00000357811 TMPRSS3P57727 454 aa16.71■□□□□ 0.26
COL13A1-202ENST00000357811 DIAPH2-AS1Q14236 149 aa16.71■□□□□ 0.26
COL13A1-202ENST00000357811 BEND2Q8NDZ0 799 aa16.71■□□□□ 0.26
COL13A1-202ENST00000357811 RNASEH2CQ8TDP1 164 aaKnown RBP16.71■□□□□ 0.26
COL13A1-202ENST00000357811 CR1LQ2VPA4 569 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 C10orf55Q5SWW7 151 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 PQLC2Q6ZP29 291 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 GOLT1BQ9Y3E0 138 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 FAM90A9PA6NNJ1 464 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 LINC00869P0C866 280 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 CFHR2P36980 270 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 PDLIM4P50479 330 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 SELENOVP59797 346 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 KIAA1644Q3SXP7 199 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 WFDC8Q8IUA0 241 aa16.7■□□□□ 0.26
COL13A1-202ENST00000357811 FOXA2Q9Y261 457 aaPredicted RBP16.7■□□□□ 0.26
COL13A1-202ENST00000357811 TRAV5A0A0B4J249 113 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 E7EUB6 86 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 SAA1P0DJI8 122 aaPredicted RBP16.69■□□□□ 0.26
COL13A1-202ENST00000357811 APELAP0DMC3 54 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 KRTCAP3Q53RY4 240 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 PRR31Q5SQ13 230 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 MORN5Q5VZ52 161 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 STUMQ69YW2 141 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 OR8I2Q8N0Y5 310 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 OR2T6Q8NHC8 308 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 TRGV8A0A0C4DH27 118 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 ZNF705FA8MVS1 300 aaPredicted RBP16.69■□□□□ 0.26
COL13A1-202ENST00000357811 M0R143 59 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 NPSP0C0P6 89 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 ZNF705DP0CH99 300 aaPredicted RBP16.69■□□□□ 0.26
COL13A1-202ENST00000357811 ZNF705BP0CI00 300 aaPredicted RBP16.69■□□□□ 0.26
COL13A1-202ENST00000357811 SUMO1P63165 101 aaKnown RBP16.69■□□□□ 0.26
COL13A1-202ENST00000357811 FOXL1Q12952 345 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 H1FXQ92522 213 aaKnown RBP16.69■□□□□ 0.26
COL13A1-202ENST00000357811 FKBP11Q9NYL4 201 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 CUL9Q8IWT3 2517 aa16.69■□□□□ 0.26
COL13A1-202ENST00000357811 KIR2DS2P43631 304 aa16.68■□□□□ 0.26
COL13A1-202ENST00000357811 RPL29P47914 159 aaKnown RBP16.68■□□□□ 0.26
COL13A1-202ENST00000357811 DLX1P56177 255 aa16.68■□□□□ 0.26
COL13A1-202ENST00000357811 CENPWQ5EE01 88 aa16.68■□□□□ 0.26
COL13A1-202ENST00000357811 MS4A10Q96PG2 267 aa16.68■□□□□ 0.26
COL13A1-202ENST00000357811 MRPL20Q9BYC9 149 aaKnown RBP16.68■□□□□ 0.26
COL13A1-202ENST00000357811 SSBP2P81877 361 aaPredicted RBP16.68■□□□□ 0.26
COL13A1-202ENST00000357811 LINC00479Q96M42 142 aa16.68■□□□□ 0.26
COL13A1-202ENST00000357811 TEX50A0A1B0GTY4 177 aa16.68■□□□□ 0.26
COL13A1-202ENST00000357811 FCN1O00602 326 aa16.68■□□□□ 0.26
COL13A1-202ENST00000357811 CA1P00915 261 aaPredicted RBP16.68■□□□□ 0.26
COL13A1-202ENST00000357811 MGST1P10620 155 aaKnown RBP16.68■□□□□ 0.26
COL13A1-202ENST00000357811 EAF1Q96JC9 268 aaPredicted RBP16.68■□□□□ 0.26
COL13A1-202ENST00000357811 UHRF2Q96PU4 802 aa16.68■□□□□ 0.26
COL13A1-202ENST00000357811 CD99P14209 185 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 IRF2P14316 349 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 PRR20EP86478 221 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 PRR20CP86479 221 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 PRR20DP86480 221 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 PRR20BP86481 221 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 PRR20AP86496 221 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 ZNF439Q8NDP4 499 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 OR1L6Q8NGR2 347 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 TMEM208Q9BTX3 173 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms