RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 MYOZ3Q8TDC0 251 aa12.12□□□□□ -0.47
TRIM13-201ENST00000356017 USMG5Q96IX5 58 aa12.12□□□□□ -0.47
TRIM13-201ENST00000356017 UBE2E2Q96LR5 201 aa12.12□□□□□ -0.47
TRIM13-201ENST00000356017 MS4A10Q96PG2 267 aa12.12□□□□□ -0.47
TRIM13-201ENST00000356017 THYN1Q9P016 225 aa12.12□□□□□ -0.47
TRIM13-201ENST00000356017 C13orf42A0A1B0GVH6 325 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 C7orf66A4D0T2 115 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 MPTX1A8MV57 137 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 MED6O75586 246 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 SPINK9Q5DT21 86 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 NECAP1Q8NC96 275 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 HIPK2Q9H2X6 1198 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 F11RQ9Y624 299 aaKnown RBP12.11□□□□□ -0.47
TRIM13-201ENST00000356017 TRBV9A0A0B4J1U6 114 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 C5orf51A6NDU8 294 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 FAM223BA6NKX1 122 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 FAM25EA8MYX2 175 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 SSNA1O43805 119 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRIM13-201ENST00000356017 RPL23AP62750 156 aaKnown RBP12.11□□□□□ -0.47
TRIM13-201ENST00000356017 KLK9Q2XQG4 91 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 GSG1LQ6UXU4 331 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 LCNL1Q6ZST4 164 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 FAM223AQ8IWN6 122 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 ZNF114Q8NC26 417 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 OR1P1Q8NH06 330 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 HEYLQ9NQ87 328 aaPredicted RBP12.11□□□□□ -0.47
TRIM13-201ENST00000356017 KLK9Q9UKQ9 250 aa12.11□□□□□ -0.47
TRIM13-201ENST00000356017 NXPH3O95157 252 aa12.1□□□□□ -0.47
TRIM13-201ENST00000356017 LY86O95711 162 aa12.1□□□□□ -0.47
TRIM13-201ENST00000356017 DTD1Q8TEA8 209 aa12.1□□□□□ -0.47
TRIM13-201ENST00000356017 OR10C1Q96KK4 312 aa12.1□□□□□ -0.47
TRIM13-201ENST00000356017 FANCD2OSQ96PS1 177 aa12.1□□□□□ -0.47
TRIM13-201ENST00000356017 CCSO14618 274 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 PRH1P02810 166 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 HTR2BP41595 481 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 NKX2-1P43699 371 aaPredicted RBP12.09□□□□□ -0.47
TRIM13-201ENST00000356017 RHOGP84095 191 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 ID3Q02535 119 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 KIAA0141Q14154 515 aaPredicted RBP12.09□□□□□ -0.47
TRIM13-201ENST00000356017 ZBTB8BQ8NAP8 495 aaPredicted RBP12.09□□□□□ -0.47
TRIM13-201ENST00000356017 OR4D5Q8NGN0 318 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 C2orf50Q96LR7 162 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 CIB3Q96Q77 187 aaPredicted RBP12.09□□□□□ -0.47
TRIM13-201ENST00000356017 RBKSQ9H477 322 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 GSKIPQ9P0R6 139 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 ALG5Q9Y673 324 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 U3KQ87 197 aa12.09□□□□□ -0.47
TRIM13-201ENST00000356017 IGLV11-55A0A075B6I3 123 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 NUDT19A8MXV4 375 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 M0QZ24 198 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 SYNGR2O43760 224 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 ATP5IP56385 69 aaPredicted RBP12.08□□□□□ -0.48
TRIM13-201ENST00000356017 C2orf68Q2NKX9 166 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 NSUN5P1Q3KNT7 163 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 SLC25A24Q6NUK1 477 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 NOXA1Q86UR1 476 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 C4orf3Q8WVX3 66 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 P2RX4Q99571 388 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 FBXL7Q9UJT9 491 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 A0A1W2PRX2 142 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 WRBO00258 174 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 OR2J3O76001 311 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 BCAP31P51572 246 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 ATP5G2Q06055 141 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 C15orf32Q32M92 178 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 FAM209BQ5JX69 171 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 C19orf35Q6ZS72 473 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 KLHL30-AS1Q8NEE0 82 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 CXorf58Q96LI9 332 aa12.08□□□□□ -0.48
TRIM13-201ENST00000356017 ADARB2-AS1A8MUL3 147 aa12.07□□□□□ -0.48
TRIM13-201ENST00000356017 CORTO00230 105 aa12.07□□□□□ -0.48
TRIM13-201ENST00000356017 GOSR2O14653 212 aa12.07□□□□□ -0.48
TRIM13-201ENST00000356017 PFDN1O60925 122 aa12.07□□□□□ -0.48
TRIM13-201ENST00000356017 RPP30P78346 268 aaKnown RBP12.07□□□□□ -0.48
TRIM13-201ENST00000356017 CYCSP99999 105 aaKnown RBP12.07□□□□□ -0.48
TRIM13-201ENST00000356017 RUNX1Q01196 453 aa12.07□□□□□ -0.48
TRIM13-201ENST00000356017 BSXQ3C1V8 233 aa12.07□□□□□ -0.48
TRIM13-201ENST00000356017 HIST2H2BDQ6DRA6 164 aa12.07□□□□□ -0.48
TRIM13-201ENST00000356017 SLC24A4Q8NFF2 622 aa12.07□□□□□ -0.48
TRIM13-201ENST00000356017 OR4F17Q8NGA8 305 aa12.07□□□□□ -0.48
TRIM13-201ENST00000356017 OR4F4Q96R69 305 aa12.07□□□□□ -0.48
TRIM13-201ENST00000356017 TET2Q6N021 2002 aaPredicted RBP12.06□□□□□ -0.48
TRIM13-201ENST00000356017 IFNA10P01566 189 aa12.06□□□□□ -0.48
TRIM13-201ENST00000356017 LGALS1P09382 135 aaKnown RBP12.06□□□□□ -0.48
TRIM13-201ENST00000356017 RNASE2P10153 161 aaKnown RBP12.06□□□□□ -0.48
TRIM13-201ENST00000356017 C2orf83Q53S99 150 aa12.06□□□□□ -0.48
TRIM13-201ENST00000356017 MAGT1Q9H0U3 335 aa12.06□□□□□ -0.48
TRIM13-201ENST00000356017 DMRT1Q9Y5R6 373 aa12.06□□□□□ -0.48
TRIM13-201ENST00000356017 TENM1Q9UKZ4 2725 aa12.05□□□□□ -0.48
TRIM13-201ENST00000356017 I3L521 148 aa12.05□□□□□ -0.48
TRIM13-201ENST00000356017 NDUFB8O95169 186 aa12.05□□□□□ -0.48
TRIM13-201ENST00000356017 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
TRIM13-201ENST00000356017 MFAP2P55001 183 aa12.05□□□□□ -0.48
TRIM13-201ENST00000356017 POLR2GP62487 172 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRIM13-201ENST00000356017 ZNF343Q6P1L6 599 aa12.05□□□□□ -0.48
TRIM13-201ENST00000356017 VN1R17PQ8TDU5 208 aa12.05□□□□□ -0.48
TRIM13-201ENST00000356017 EEF1AKMT3Q96AZ1 226 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms