RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 S1PR3Q99500 378 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 A0A087X0M5 115 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 A0A0U1RQK1 487 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 TEX50A0A1B0GTY4 177 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 A0A1B0GX30 115 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 A4D1N5 150 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 TMEM250H0YL14 139 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 PPP1R2P9O14990 202 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 TMPRSS2O15393 492 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 S100A9P06702 114 aaKnown RBP4.91□□□□□ -1.62
CLCN3-201ENST00000347613 APELAP0DMC3 54 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 HIST1H1BP16401 226 aaKnown RBP4.91□□□□□ -1.62
CLCN3-201ENST00000347613 CD40P25942 277 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 CDSNQ15517 529 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 SSX2Q16385 188 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 ATP6V1FQ16864 119 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 ZNF788Q6ZQV5 615 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 DOLPP1Q86YN1 238 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 NEIL1Q96FI4 390 aaPredicted RBP4.91□□□□□ -1.62
CLCN3-201ENST00000347613 CTSZQ9UBR2 303 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 XKRY2A2RUG3 117 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 LYNX1G3V0Z9 82 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 GGCTO75223 188 aaKnown RBP4.9□□□□□ -1.62
CLCN3-201ENST00000347613 OR10J4P0C629 311 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 LYNX1P0DP58 116 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 PRR20EP86478 221 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 PRR20CP86479 221 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 PRR20DP86480 221 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 PRR20BP86481 221 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 PRR20AP86496 221 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 ASCL5Q7RTU5 278 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 C11orf42Q8N5U0 333 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 FAM168AQ92567 244 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 MALRD1Q5VYJ5 2156 aa4.9□□□□□ -1.62
CLCN3-201ENST00000347613 TPRP12270 2363 aaKnown RBP4.9□□□□□ -1.63
CLCN3-201ENST00000347613 H7BYZ3 331 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 SPINK4O60575 86 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 HRASP01112 189 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 CNTFRP26992 372 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 CEACAM8P31997 349 aaPredicted RBP4.9□□□□□ -1.63
CLCN3-201ENST00000347613 OPRK1P41145 380 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 SLC35B1P78383 322 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 MRPS11P82912 194 aaKnown RBP4.9□□□□□ -1.63
CLCN3-201ENST00000347613 TNFAIP6P98066 277 aaPredicted RBP4.9□□□□□ -1.63
CLCN3-201ENST00000347613 TMEM200BQ69YZ2 307 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 TRAT1Q6PIZ9 186 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 OR4P4Q8NGL7 312 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 OR1P1Q8NH06 330 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 TXN2Q99757 166 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 MRPL20Q9BYC9 149 aaKnown RBP4.9□□□□□ -1.63
CLCN3-201ENST00000347613 FNDC4Q9H6D8 234 aaPredicted RBP4.9□□□□□ -1.63
CLCN3-201ENST00000347613 ZNF469Q96JG9 3925 aaPredicted RBP4.9□□□□□ -1.63
CLCN3-201ENST00000347613 KLK10O43240 276 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 REG1AP05451 166 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 SAA1P0DJI8 122 aaPredicted RBP4.9□□□□□ -1.63
CLCN3-201ENST00000347613 CHRNB4P30926 498 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 ADMP35318 185 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 RPL31P62899 125 aaKnown RBP4.9□□□□□ -1.63
CLCN3-201ENST00000347613 IGFL3Q6UXB1 125 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 TMEM183AQ8IXX5 376 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 NHLRC2Q8NBF2 726 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 ELOVL5Q9NYP7 299 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 OR51B2Q9Y5P1 312 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 PTPRQQ9UMZ3 2332 aa4.9□□□□□ -1.63
CLCN3-201ENST00000347613 MED13LQ71F56 2210 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 GGTLC3B5MD39 225 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 CIDEAO60543 219 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 PLAUP00749 431 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 CA1P00915 261 aaPredicted RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 IGLV2-8P01709 118 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 CBLN1P23435 193 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 GRNP28799 593 aaKnown RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 GATA4P43694 442 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 TDGF1P3P51864 188 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 ZNF90Q03938 601 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 WT1-ASQ06250 92 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 BSPH1Q075Z2 132 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 ACOT6Q3I5F7 207 aaPredicted RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 SLC25A48Q6ZT89 311 aaKnown RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 ZADH2Q8N4Q0 377 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 CISD2Q8N5K1 135 aaKnown RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 SLC24A4Q8NFF2 622 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 ANAPC16Q96DE5 110 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 UHRF2Q96PU4 802 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 CTDSP1Q9GZU7 261 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 RNASE7Q9H1E1 156 aaKnown RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 RNF7Q9UBF6 113 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 IGHV3-72A0A0B4J1Y9 119 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 SERTM2A0A1B0GWG4 89 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 PSMB11A5LHX3 300 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 TNFRSF13BO14836 293 aaPredicted RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 FSTL3O95633 263 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 PAX1P15863 534 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 GCHFRP30047 84 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 PDLIM4P50479 330 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 MFAP2P55001 183 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 HSPE1P61604 102 aaKnown RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 PATE2Q6UY27 113 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 WFDC8Q8IUA0 241 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 ZNF709Q8N972 641 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms