RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SLC45A2Q9UMX9 530 aa12.54□□□□□ -0.4
UPF3B-202ENST00000345865 NAV3Q8IVL0 2385 aa12.54□□□□□ -0.4
UPF3B-202ENST00000345865 K7ENP7 123 aa12.54□□□□□ -0.4
UPF3B-202ENST00000345865 DVL1O14640 695 aa12.54□□□□□ -0.4
UPF3B-202ENST00000345865 PPP1R2P9O14990 202 aa12.54□□□□□ -0.4
UPF3B-202ENST00000345865 ACTL6BO94805 426 aa12.54□□□□□ -0.4
UPF3B-202ENST00000345865 FAM87AP0C7U9 286 aa12.54□□□□□ -0.4
UPF3B-202ENST00000345865 RNASE2P10153 161 aaKnown RBP12.54□□□□□ -0.4
UPF3B-202ENST00000345865 GAMTQ14353 236 aa12.54□□□□□ -0.4
UPF3B-202ENST00000345865 MIR17HGQ75NE6 70 aa12.54□□□□□ -0.4
UPF3B-202ENST00000345865 FNDC10F2Z333 226 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 F6UZH7 168 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 S100PP25815 95 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 LOXP28300 417 aaPredicted RBP12.53□□□□□ -0.4
UPF3B-202ENST00000345865 FAM3BP58499 235 aaPredicted RBP12.53□□□□□ -0.4
UPF3B-202ENST00000345865 RHOBP62745 196 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 C2orf83Q53S99 150 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 TMEM144Q7Z5S9 345 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 OR4P4Q8NGL7 312 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 OR10D4PQ8NGN7 298 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 OR5B3Q8NH48 314 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 OSR1Q8TAX0 266 aaPredicted RBP12.53□□□□□ -0.4
UPF3B-202ENST00000345865 OR51M1Q9H341 326 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 NDUFB3O43676 98 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 GGCTO75223 188 aaKnown RBP12.53□□□□□ -0.4
UPF3B-202ENST00000345865 DLX6P56179 175 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 RAB31Q13636 194 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 FAM78BQ5VT40 261 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 NDUFA4L2Q9NRX3 87 aa12.53□□□□□ -0.4
UPF3B-202ENST00000345865 PRSS8Q16651 343 aa12.52□□□□□ -0.41
UPF3B-202ENST00000345865 TMEM177Q53S58 311 aa12.52□□□□□ -0.41
UPF3B-202ENST00000345865 OR9G1Q8NH87 305 aa12.52□□□□□ -0.41
UPF3B-202ENST00000345865 ST6GALNAC6Q969X2 333 aa12.52□□□□□ -0.41
UPF3B-202ENST00000345865 NABP2Q9BQ15 211 aa12.52□□□□□ -0.41
UPF3B-202ENST00000345865 ELOA3CA0A087WX78 387 aaPredicted RBP12.51□□□□□ -0.41
UPF3B-202ENST00000345865 CGB1A6NKQ9 187 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 PPP5D1E7EU14 171 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 PLAUP00749 431 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 APOA2P02652 100 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 S100A2P29034 98 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 LRRC10Q5BKY1 277 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 C11orf42Q8N5U0 333 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 OR10X1Q8NGY0 326 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 DYNLRB1Q9NP97 96 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 FKBP11Q9NYL4 201 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 HNF1AP20823 631 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 OR10J1P30954 320 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 DLX1P56177 255 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 C10orf55Q5SWW7 151 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 OR1L8Q8NGR8 309 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 OCC1Q8TAD7 63 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 ZNF596Q8TC21 504 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 FLYWCH2Q96CP2 140 aaKnown RBP12.51□□□□□ -0.41
UPF3B-202ENST00000345865 ZNF503Q96F45 646 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 RITA1Q96K30 269 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 TXNDC17Q9BRA2 123 aa12.51□□□□□ -0.41
UPF3B-202ENST00000345865 IGLV2-23P01705 113 aa12.5□□□□□ -0.41
UPF3B-202ENST00000345865 FABP4P15090 132 aa12.5□□□□□ -0.41
UPF3B-202ENST00000345865 SRP14P37108 136 aaKnown RBP12.5□□□□□ -0.41
UPF3B-202ENST00000345865 RPL8P62917 257 aaKnown RBP12.5□□□□□ -0.41
UPF3B-202ENST00000345865 CD69Q07108 199 aa12.5□□□□□ -0.41
UPF3B-202ENST00000345865 LINC00311Q8N616 119 aa12.5□□□□□ -0.41
UPF3B-202ENST00000345865 OR2T6Q8NHC8 308 aa12.5□□□□□ -0.41
UPF3B-202ENST00000345865 SFRP2Q96HF1 295 aa12.5□□□□□ -0.41
UPF3B-202ENST00000345865 COMMD5Q9GZQ3 224 aa12.5□□□□□ -0.41
UPF3B-202ENST00000345865 IGHV2-70P01814 119 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 CD99P14209 185 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 WT1-ASQ06250 92 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 TMEM155Q4W5P6 130 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 OR4C13Q8NGP0 309 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 TPSG1Q9NRR2 321 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 KAAG1Q9UBP8 84 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 PITPNC1Q9UKF7 332 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 FUT9Q9Y231 359 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 SPTA1P02549 2419 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.49□□□□□ -0.41
UPF3B-202ENST00000345865 VSTM5A8MXK1 200 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 LYNX1G3V0Z9 82 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 K7EN84 100 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 TYMSP04818 313 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 LYNX1P0DP58 116 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 IL3RAP26951 378 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 SSBP2P81877 361 aaPredicted RBP12.49□□□□□ -0.41
UPF3B-202ENST00000345865 PRB3Q04118 309 aaPredicted RBP12.49□□□□□ -0.41
UPF3B-202ENST00000345865 SSX8Q7RTT4 187 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 TMEM167AQ8TBQ9 72 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 HIST1H2BLQ99880 126 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 MALRD1Q5VYJ5 2156 aa12.49□□□□□ -0.41
UPF3B-202ENST00000345865 IGHV1-69-2A0A0G2JMI3 117 aa12.48□□□□□ -0.41
UPF3B-202ENST00000345865 IGHV1-8P0DP01 117 aa12.48□□□□□ -0.41
UPF3B-202ENST00000345865 PSG5Q15238 335 aa12.48□□□□□ -0.41
UPF3B-202ENST00000345865 MRGPRG-AS1Q2M3A8 158 aa12.48□□□□□ -0.41
UPF3B-202ENST00000345865 ACTL10Q5JWF8 245 aa12.48□□□□□ -0.41
UPF3B-202ENST00000345865 LINC01560Q8TB33 94 aa12.48□□□□□ -0.41
UPF3B-202ENST00000345865 TMEM37Q8WXS4 190 aa12.48□□□□□ -0.41
UPF3B-202ENST00000345865 TMEM186Q96B77 213 aa12.48□□□□□ -0.41
UPF3B-202ENST00000345865 VKORC1Q9BQB6 163 aa12.48□□□□□ -0.41
UPF3B-202ENST00000345865 ZNF430Q9H8G1 570 aaPredicted RBP12.48□□□□□ -0.41
UPF3B-202ENST00000345865 TPRP12270 2363 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms