RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 LIM2P55344 173 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 TAL2Q16559 108 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 OR8D4Q8NGM9 314 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF519Q8TB69 540 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 V9GYY9 64 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 MUC22E2RYF6 1773 aaPredicted RBP2.81□□□□□ -1.96
CSMD3-202ENST00000339701 A8MWV9 139 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 H3BQ15 152 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 J3QLI3 93 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 TSPAN2O60636 221 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 ZFPL1O95159 310 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 APOMO95445 188 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 PVRIGQ6DKI7 326 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 DUX5Q96PT3 197 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 TRAV39A0A0B4J263 110 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 PGPA6NDG6 321 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 ITGB1BP1O14713 200 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 LHBP01229 141 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 CGB3P0DN86 165 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 RPL32P62910 135 aaKnown RBP2.81□□□□□ -1.96
CSMD3-202ENST00000339701 SAMD5Q5TGI4 173 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 DMKNQ6E0U4 476 aaPredicted RBP2.81□□□□□ -1.96
CSMD3-202ENST00000339701 OR13A1Q8NGR1 328 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 PLEKHB2Q96CS7 222 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF385AQ96PM9 386 aaKnown RBP2.81□□□□□ -1.96
CSMD3-202ENST00000339701 HIGD1AQ9Y241 93 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 LENEPQ9Y5L5 61 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 FBXO45P0C2W1 286 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 HOXD3P31249 432 aaPredicted RBP2.81□□□□□ -1.96
CSMD3-202ENST00000339701 PGFP49763 221 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 PPP1R32Q7Z5V6 425 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 MARCH3Q86UD3 253 aa2.81□□□□□ -1.96
CSMD3-202ENST00000339701 UPK1AO00322 258 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 TSPAN13O95857 204 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 CGB7P0DN87 165 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 CLDN12P56749 244 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 FGF12P61328 243 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 GAGE1Q13065 139 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 RFLNAQ6ZTI6 216 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 CYB561D1Q8N8Q1 229 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 OR8A1Q8NGG7 326 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 NRTNQ99748 197 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 MARCH4Q9P2E8 410 aaPredicted RBP2.8□□□□□ -1.96
CSMD3-202ENST00000339701 RNF7Q9UBF6 113 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 IGHV1-69-2A0A0G2JMI3 117 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 SPINT1O43278 529 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 FSTL3O95633 263 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 OR2H2O95918 312 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 HSPE1P61604 102 aaKnown RBP2.8□□□□□ -1.96
CSMD3-202ENST00000339701 FBXW9Q5XUX1 488 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 ASPHD2Q6ICH7 369 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 MRPL14Q6P1L8 145 aaKnown RBP2.8□□□□□ -1.96
CSMD3-202ENST00000339701 RNASEKQ6P5S7 137 aaKnown RBP2.8□□□□□ -1.96
CSMD3-202ENST00000339701 C18orf12Q96KH6 178 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 PAXXQ9BUH6 204 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 RBM38Q9H0Z9 239 aaKnown RBP2.8□□□□□ -1.96
CSMD3-202ENST00000339701 PILRAQ9UKJ1 303 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 COL4A2P08572 1712 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 LDLRAD4O15165 306 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 HTN1P15515 57 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 PFN3P60673 137 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 ACP7Q6ZNF0 438 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 OR1B1Q8NGR6 318 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 ALG14Q96F25 216 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 FOXJ2Q9P0K8 574 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 TLN2Q9Y4G6 2542 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 EPOPA6NHQ4 379 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 PYCARD-AS1I3L0S3 204 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 PLPP3O14495 311 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 CELA3AP09093 270 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF688P0C7X2 276 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 CD59P13987 128 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 LY6EQ16553 131 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 SPSB3Q6PJ21 355 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 NCOA6Q14686 2063 aaPredicted RBP2.8□□□□□ -1.96
CSMD3-202ENST00000339701 LOC389332A0A1B0GUA5 103 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 F8W1H4 67 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 PLA2G2AP14555 144 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 PCP4P48539 62 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 C15orf53Q8NAA6 179 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM126AQ9H061 195 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM74BQ9NUR3 256 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 MRPL16Q9NX20 251 aaKnown RBP2.8□□□□□ -1.96
CSMD3-202ENST00000339701 CCL27Q9Y4X3 112 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 A0A1W2PR80 420 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 SIVA1O15304 175 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 CEACAM5P06731 702 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 MRPS11P82912 194 aaKnown RBP2.8□□□□□ -1.96
CSMD3-202ENST00000339701 CD300CQ08708 224 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 STHQ8IWL8 128 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 DLL3Q9NYJ7 618 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 POLQO75417 2590 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 A0A0G2JMM0 328 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 A0A1W2PPB8 328 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 A0A1W2PRS3 328 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 KIR3DP1A8MWS1 328 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 NDUFC1O43677 76 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 ATP6V0CP27449 155 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 FAM159AQ6UWV7 190 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 CCL4L1Q8NHW4 92 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms