RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 HINT1P49773 126 aaPredicted RBP13.27□□□□□ -0.28
SCARB1-202ENST00000339570 C11orf42Q8N5U0 333 aa13.27□□□□□ -0.28
SCARB1-202ENST00000339570 C9orf106Q8NAJ2 232 aa13.27□□□□□ -0.28
SCARB1-202ENST00000339570 STARD4Q96DR4 205 aa13.27□□□□□ -0.28
SCARB1-202ENST00000339570 LPAR2Q9HBW0 351 aa13.27□□□□□ -0.28
SCARB1-202ENST00000339570 NRN1Q9NPD7 142 aa13.27□□□□□ -0.28
SCARB1-202ENST00000339570 DCAF16Q9NXF7 216 aa13.27□□□□□ -0.28
SCARB1-202ENST00000339570 ZNF586Q9NXT0 402 aa13.27□□□□□ -0.28
SCARB1-202ENST00000339570 SAA2-SAA4A0A096LPE2 208 aa13.27□□□□□ -0.29
SCARB1-202ENST00000339570 SAA2P0DJI9 122 aaPredicted RBP13.27□□□□□ -0.29
SCARB1-202ENST00000339570 MSMPQ1L6U9 139 aa13.27□□□□□ -0.29
SCARB1-202ENST00000339570 TIGITQ495A1 244 aa13.27□□□□□ -0.29
SCARB1-202ENST00000339570 FAM214BQ7L5A3 538 aa13.27□□□□□ -0.29
SCARB1-202ENST00000339570 ZCCHC24Q8N2G6 241 aaKnown RBP13.27□□□□□ -0.29
SCARB1-202ENST00000339570 DSCAMO60469 2012 aa13.27□□□□□ -0.29
SCARB1-202ENST00000339570 MORN5Q5VZ52 161 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 MIEN1Q9BRT3 115 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 MMP23AO75900 390 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 PYYP10082 97 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 LGALS4P56470 323 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 PMCHL1Q16048 86 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 ZNF355PQ9NSJ1 428 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 OR51B2Q9Y5P1 312 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 A0A1W2PN81 502 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 J3QR06 171 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 DLEU1O43261 78 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 OR2T6Q8NHC8 308 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 GMPPAQ96IJ6 420 aaPredicted RBP13.26□□□□□ -0.29
SCARB1-202ENST00000339570 IFI27L2Q9H2X8 130 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 CALYQ9NYX4 217 aa13.26□□□□□ -0.29
SCARB1-202ENST00000339570 M0QZ24 198 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 MT-CO2P00403 227 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 RANP62826 216 aaKnown RBP13.25□□□□□ -0.29
SCARB1-202ENST00000339570 MRPS11P82912 194 aaKnown RBP13.25□□□□□ -0.29
SCARB1-202ENST00000339570 Q56UQ5 140 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 CT45A1Q5HYN5 189 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 CT45A3Q8NHU0 189 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 HES4Q9HCC6 221 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 TNFSF13O75888 250 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 BRS3P32247 399 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 TRAT1Q6PIZ9 186 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 BLNKQ8WV28 456 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 ITLN1Q8WWA0 313 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 CCL13Q99616 98 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 V9GYV3 84 aa13.25□□□□□ -0.29
SCARB1-202ENST00000339570 IGKV1OR2-108A0A075B7D4 117 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 SIAH2O43255 324 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 REG1AP05451 166 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 ADH4P08319 380 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 CD99P14209 185 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 ACP1P24666 158 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 IBA57Q5T440 356 aaKnown RBP13.24□□□□□ -0.29
SCARB1-202ENST00000339570 GCSAMQ8N6F7 178 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 MDS2Q8NDY4 140 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 MCRIP2Q9BUT9 160 aaKnown RBP13.24□□□□□ -0.29
SCARB1-202ENST00000339570 GGTLC3B5MD39 225 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 YPEL3P61236 119 aaPredicted RBP13.24□□□□□ -0.29
SCARB1-202ENST00000339570 SSBP2P81877 361 aaPredicted RBP13.24□□□□□ -0.29
SCARB1-202ENST00000339570 FAM216BQ8N7L0 139 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 ABCA4P78363 2273 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 SVEP1Q4LDE5 3571 aa13.24□□□□□ -0.29
SCARB1-202ENST00000339570 USF1P22415 310 aaPredicted RBP13.23□□□□□ -0.29
SCARB1-202ENST00000339570 RAB7AP51149 207 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 C10orf55Q5SWW7 151 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 RNASEKQ6P5S7 137 aaKnown RBP13.23□□□□□ -0.29
SCARB1-202ENST00000339570 Q6ZT83 130 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 WDR31Q8NA23 367 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 OR4S2Q8NH73 311 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 WNK2Q9Y3S1 2297 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 MFAP2P55001 183 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 GNG5P63218 68 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 PAFAH1B2P68402 229 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 INO80CQ6PI98 192 aaPredicted RBP13.23□□□□□ -0.29
SCARB1-202ENST00000339570 FER1L6-AS2Q96M78 137 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 SLC35D1Q9NTN3 355 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 SELENOKQ9Y6D0 94 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 IGHV2OR16-5A0A0B4J2B6 119 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 SH2D7A6NKC9 451 aaPredicted RBP13.23□□□□□ -0.29
SCARB1-202ENST00000339570 MPDU1O75352 247 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 GPX1P07203 203 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 OR5G3P0C626 314 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 CHRNB4P30926 498 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 KIR2DL2P43627 348 aaPredicted RBP13.23□□□□□ -0.29
SCARB1-202ENST00000339570 HNRNPA3P51991 378 aaKnown RBP13.23□□□□□ -0.29
SCARB1-202ENST00000339570 UBE2L3P68036 154 aaKnown RBP13.23□□□□□ -0.29
SCARB1-202ENST00000339570 RAB1CQ92928 201 aa13.23□□□□□ -0.29
SCARB1-202ENST00000339570 A0A1W2PS18 150 aa13.22□□□□□ -0.29
SCARB1-202ENST00000339570 HSPE1P61604 102 aaKnown RBP13.22□□□□□ -0.29
SCARB1-202ENST00000339570 DNAJC4Q9NNZ3 241 aa13.22□□□□□ -0.29
SCARB1-202ENST00000339570 IGHV1-18A0A0C4DH31 117 aa13.22□□□□□ -0.29
SCARB1-202ENST00000339570 C15orf61A6NNL5 157 aa13.22□□□□□ -0.29
SCARB1-202ENST00000339570 SRRM4A7MD48 611 aaKnown RBP13.22□□□□□ -0.29
SCARB1-202ENST00000339570 FOXA3P55318 350 aaPredicted RBP13.22□□□□□ -0.29
SCARB1-202ENST00000339570 C19orf35Q6ZS72 473 aa13.22□□□□□ -0.29
SCARB1-202ENST00000339570 STPG4Q8N801 248 aa13.22□□□□□ -0.29
SCARB1-202ENST00000339570 FDCSPQ8NFU4 85 aa13.22□□□□□ -0.29
SCARB1-202ENST00000339570 BORCS7Q96B45 105 aa13.22□□□□□ -0.29
SCARB1-202ENST00000339570 ASCL2Q99929 193 aa13.22□□□□□ -0.29
SCARB1-202ENST00000339570 C3orf79P0CE67 100 aa13.21□□□□□ -0.29
SCARB1-202ENST00000339570 RPL8P62917 257 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms