RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 C7orf71A4D174 169 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 MT-ND6P03923 174 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 Q56UQ5 140 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 C20orf204Q6ZNR8 217 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 LINC00173Q6ZV60 143 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 OR8I2Q8N0Y5 310 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 OR2Z1Q8NG97 314 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 OR1F12Q8NHA8 337 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 C18orf15Q96N68 181 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 HS3ST6Q96QI5 342 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 TNFRSF19Q9NS68 423 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 CACNG5Q9UF02 275 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 SPTAN1Q13813 2472 aaKnown RBP4.61□□□□□ -1.67
CSDE1-202ENST00000339438 A0A1B0GV72 72 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 C9orf118A6NHY6 69 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 MSR1P21757 451 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 HERV-K104P61576 105 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 HBG1P69891 147 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 HBG2P69892 147 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 TCTEX1D4Q5JR98 221 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 MED12LQ86YW9 2145 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 WIPF2Q8TF74 440 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-202ENST00000339438 NABP1Q96AH0 204 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 TAAR6Q96RI8 345 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 FNDC4Q9H6D8 234 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-202ENST00000339438 NPIPA5E9PKD4 350 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 TRAPPC2LH3BP13 241 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 M0R1X1 148 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 RBM11P57052 281 aaKnown RBP4.61□□□□□ -1.67
CSDE1-202ENST00000339438 UBE2G1P62253 170 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 PMP22Q01453 160 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 C12orf54Q6X4T0 127 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 ZNF841Q6ZN19 808 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 PIP4P2Q8N4L2 257 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 ULBP2Q9BZM5 246 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 GTSF1LQ9H1H1 148 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 THYN1Q9P016 225 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 JKAMPQ9P055 326 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 NPIPA1Q9UND3 350 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 TRGV10A0A0A0MS01 117 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 C21orf140B9A014 251 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-202ENST00000339438 RAB29O14966 203 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 BRI3O95415 125 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 GRB2P62993 217 aaKnown RBP4.6□□□□□ -1.67
CSDE1-202ENST00000339438 RPEL1Q2QD12 228 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 PLCXD3Q63HM9 321 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 SHISA2Q6UWI4 295 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 C6orf15Q6UXA7 325 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-202ENST00000339438 OSR2Q8N2R0 312 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 TMEM204Q9BSN7 226 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 NAT8BQ9UHF3 227 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 FBN1P35555 2871 aaKnown RBP4.6□□□□□ -1.67
CSDE1-202ENST00000339438 MXRA5Q9NR99 2828 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 TRAV38-1A0A0B4J264 116 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 TEX48A0A1B0GUV7 120 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 GAGE10A6NGK3 116 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 GP1BBP13224 206 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 PLA2G2AP14555 144 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 HIST1H1AQ02539 215 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-202ENST00000339438 C17orf67Q0P5P2 114 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 KRTAP27-1Q3LI81 207 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 COLCA1Q6ZS62 124 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 PLPPR2Q96GM1 343 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 ZNF479Q96JC4 524 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 CHRDL1Q9BU40 450 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 RAXQ9Y2V3 346 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 TET2Q6N021 2002 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-202ENST00000339438 OR4C46A6NHA9 309 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 ZNHIT1O43257 154 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 STAG3L2P0CL84 134 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 STAG3L3P0CL85 134 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 BRWD1-AS2P59051 145 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 MEF2CQ06413 473 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-202ENST00000339438 SMAGPQ0VAQ4 97 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 SPANXN5Q5MJ07 72 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 C1orf122Q6ZSJ8 110 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 NINJ1Q92982 152 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 POM121L2Q96KW2 1035 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 SIGMAR1Q99720 223 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 SSBP4Q9BWG4 385 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-202ENST00000339438 FGF23Q9GZV9 251 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-202ENST00000339438 MTCH1Q9NZJ7 389 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 DNAH9Q9NYC9 4486 aa4.6□□□□□ -1.67
CSDE1-202ENST00000339438 ZNF816-ZNF321PA0A0X1KG74 233 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 PSMB11A5LHX3 300 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 H3BRM9 83 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 HAND1O96004 215 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 COX5AP20674 150 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 CRYGSP22914 178 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 FOXC1Q12948 553 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 RAB31Q13636 194 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 NEU4Q8WWR8 484 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-202ENST00000339438 TMEM45BQ96B21 275 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 BORCS7Q96B45 105 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 OR2D2Q9H210 308 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 C19orf25Q9UFG5 118 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-202ENST00000339438 POLEQ07864 2286 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 IGLV3-32A0A0A0MS00 114 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 PRSS46E5RG02 174 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms