RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PRRT1Q99946 306 aa11.59□□□□□ -0.55
PRKN-201ENST00000338468 HUWE1Q7Z6Z7 4374 aaKnown RBP11.59□□□□□ -0.55
PRKN-201ENST00000338468 TRBV7-1A0A0A6YYK4 115 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 CLEC3BP05452 202 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 OR5AC1P0C628 307 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 ARL3P36405 182 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 HSPE1P61604 102 aaKnown RBP11.58□□□□□ -0.56
PRKN-201ENST00000338468 PRCDQ00LT1 54 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 SLC25A24Q6NUK1 477 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 GPHB5Q86YW7 130 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 GLYATL2Q8WU03 294 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 TMEM230Q96A57 120 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 CXorf58Q96LI9 332 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 TMEM56Q96MV1 263 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 TMEM222Q9H0R3 208 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 NAA60Q9H7X0 242 aa11.58□□□□□ -0.56
PRKN-201ENST00000338468 C14orf166Q9Y224 244 aaKnown RBP11.58□□□□□ -0.56
PRKN-201ENST00000338468 IZUMO1RA6ND01 250 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 CRYM-AS1A6NIL9 109 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 F8W735 103 aaPredicted RBP11.57□□□□□ -0.56
PRKN-201ENST00000338468 K7EIM0 57 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 LGALS9O00182 355 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 B3GALNT1O75752 331 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 CDS2O95674 445 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 GPR183P32249 361 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 TRIM16LQ309B1 348 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 PYDC2Q56P42 97 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 Q6ZRM9 215 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 Q8N1Y9 231 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 OR2C3Q8N628 320 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 VN1R17PQ8TDU5 208 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 ZC4H2Q9NQZ6 224 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 PEMTQ9UBM1 199 aa11.57□□□□□ -0.56
PRKN-201ENST00000338468 IGHV3-21A0A0B4J1V1 117 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 TEX13DA0A0J9YY54 714 aaPredicted RBP11.56□□□□□ -0.56
PRKN-201ENST00000338468 C2orf70A6NJV1 201 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 S100A5P33763 92 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 ETV6P41212 452 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 AKR1C2P52895 323 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 SPINK9Q5DT21 86 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 SELENOHQ8IZQ5 122 aaKnown RBP11.56□□□□□ -0.56
PRKN-201ENST00000338468 Q8N402 240 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 ZNF114Q8NC26 417 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 OR1P1Q8NH06 330 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 SCARB1Q8WTV0 552 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 ZNF414Q96IQ9 312 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 MCUBQ9NWR8 336 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 THYN1Q9P016 225 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 SCP2D1Q9UJQ7 156 aa11.56□□□□□ -0.56
PRKN-201ENST00000338468 ST8SIA3O43173 380 aa11.55□□□□□ -0.56
PRKN-201ENST00000338468 NHLRC4P0CG21 123 aaPredicted RBP11.55□□□□□ -0.56
PRKN-201ENST00000338468 UNQ9165/PRO28630Q6UXU0 137 aa11.55□□□□□ -0.56
PRKN-201ENST00000338468 SMAD5-AS1Q9Y6J3 95 aa11.55□□□□□ -0.56
PRKN-201ENST00000338468 U3KQK5 164 aa11.55□□□□□ -0.56
PRKN-201ENST00000338468 TMEM213A2RRL7 107 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 A8MWP6 167 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 INS-IGF2F8WCM5 200 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 I3L2K1 104 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 CYB5BO43169 146 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 TGOLN2O43493 480 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 ATG12O94817 140 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 FOLR2P14207 255 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 SUPT4H1P63272 117 aaKnown RBP11.54□□□□□ -0.56
PRKN-201ENST00000338468 TMEM187Q14656 261 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 AARDQ4LEZ3 155 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 OR1L6Q8NGR2 347 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 CACNG8Q8WXS5 425 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 RBPMSQ93062 196 aaKnown RBP11.54□□□□□ -0.56
PRKN-201ENST00000338468 SRRQ9GZT4 340 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 PLEKHA3Q9HB20 300 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 PRR13Q9NZ81 148 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 TMEM56-RWDD3S4R434 201 aa11.54□□□□□ -0.56
PRKN-201ENST00000338468 STAB2Q8WWQ8 2551 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 IGHV3-35A0A0C4DH35 117 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 OR2T8A6NH00 312 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 C3orf84H3BNL1 204 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 ADMP35318 185 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 DHODHQ02127 395 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 DEFB114Q30KQ6 69 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 CD300EQ496F6 205 aaPredicted RBP11.53□□□□□ -0.56
PRKN-201ENST00000338468 PVRIGQ6DKI7 326 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 PLET1Q6UQ28 207 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 TOMM5Q8N4H5 51 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 RRNAD1Q96FB5 475 aaKnown RBP11.53□□□□□ -0.56
PRKN-201ENST00000338468 GALNT14Q96FL9 552 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 ATP6V0BQ99437 205 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 ASCL2Q99929 193 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 CHRDL1Q9BU40 450 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 ZNF436Q9C0F3 470 aaPredicted RBP11.53□□□□□ -0.56
PRKN-201ENST00000338468 C21orf62Q9NYP8 219 aa11.53□□□□□ -0.56
PRKN-201ENST00000338468 ZNF320A2RRD8 509 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 ZNF785A8K8V0 405 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 CBLN1P23435 193 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 FAM106AQ4KMX7 169 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 TM4SF20Q53R12 229 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 TMEM268Q5VZI3 342 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 FAM219AQ8IW50 185 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 SGPP2Q8IWX5 399 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 OR2K2Q8NGT1 345 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 GPR146Q96CH1 333 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms