RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 AURKAIP1Q9NWT8 199 aaPredicted RBP11.83□□□□□ -0.52
TPM3-206ENST00000330188 KAAG1Q9UBP8 84 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 DMXL2Q8TDJ6 3036 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 TRBV20OR9-2A0A075B6H5 130 aa11.82□□□□□ -0.52
TPM3-206ENST00000330188 A0A1W2PPQ1 181 aa11.82□□□□□ -0.52
TPM3-206ENST00000330188 FAM87AP0C7U9 286 aa11.82□□□□□ -0.52
TPM3-206ENST00000330188 CD99P14209 185 aa11.82□□□□□ -0.52
TPM3-206ENST00000330188 CHRNA7P36544 502 aa11.82□□□□□ -0.52
TPM3-206ENST00000330188 SRP14P37108 136 aaKnown RBP11.82□□□□□ -0.52
TPM3-206ENST00000330188 ST6GALNAC6Q969X2 333 aa11.82□□□□□ -0.52
TPM3-206ENST00000330188 VKORC1Q9BQB6 163 aa11.82□□□□□ -0.52
TPM3-206ENST00000330188 GPR61Q9BZJ8 451 aa11.82□□□□□ -0.52
TPM3-206ENST00000330188 GSN-AS1Q9NRJ2 163 aa11.82□□□□□ -0.52
TPM3-206ENST00000330188 PGPEP1LA6NFU8 196 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 PPP5D1E7EU14 171 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 FABP1P07148 127 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 C1QTNF9P0C862 333 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 S100A2P29034 98 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 RPL8P62917 257 aaKnown RBP11.81□□□□□ -0.52
TPM3-206ENST00000330188 GAMTQ14353 236 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 FAM78BQ5VT40 261 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 MIR17HGQ75NE6 70 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 PDPNQ86YL7 162 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 OR4P4Q8NGL7 312 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 TMEM186Q96B77 213 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 OR51M1Q9H341 326 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 DCHS1Q96JQ0 3298 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 ROS1P08922 2347 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 ARFGEF3Q5TH69 2177 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 E7EUB6 86 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 CD69Q07108 199 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 MLANAQ16655 118 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 TMEM155Q4W5P6 130 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 PDZD11Q5EBL8 140 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 PYY3Q5JQD4 70 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 OR2T10Q8NGZ9 312 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 COMMD5Q9GZQ3 224 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 FUT9Q9Y231 359 aa11.81□□□□□ -0.52
TPM3-206ENST00000330188 IGHV1-69-2A0A0G2JMI3 117 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 INS-IGF2F8WCM5 200 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 ACTL6BO94805 426 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 MT-CO2P00403 227 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 TYMSP04818 313 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 USF1P22415 310 aaPredicted RBP11.8□□□□□ -0.52
TPM3-206ENST00000330188 OR10J1P30954 320 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 APOBEC3AP31941 199 aaPredicted RBP11.8□□□□□ -0.52
TPM3-206ENST00000330188 ZNF137PP52743 207 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 TMEM167AQ8TBQ9 72 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 SLC35E1Q96K37 410 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 MIOXQ9UGB7 285 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 MAP1BP46821 2468 aaKnown RBP11.8□□□□□ -0.52
TPM3-206ENST00000330188 A0A087X0M5 115 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.8□□□□□ -0.52
TPM3-206ENST00000330188 A0A1B0GX30 115 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 IGLV2-23P01705 113 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 FAM3BP58499 235 aaPredicted RBP11.8□□□□□ -0.52
TPM3-206ENST00000330188 CTAG1AP78358 180 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 KCNIP4Q6PIL6 250 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 OR4A5Q8NH83 315 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 C11orf52Q96A22 123 aa11.8□□□□□ -0.52
TPM3-206ENST00000330188 CGB1A6NKQ9 187 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 DLL1O00548 723 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 IGHV1-8P0DP01 117 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 GATA2P23769 480 aaPredicted RBP11.79□□□□□ -0.52
TPM3-206ENST00000330188 ERHP84090 104 aaKnown RBP11.79□□□□□ -0.52
TPM3-206ENST00000330188 OR10D4PQ8NGN7 298 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 OR9G1Q8NH87 305 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 VSTM2AQ8TAG5 236 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 SFRP2Q96HF1 295 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 PITPNC1Q9UKF7 332 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 WASHC3Q9Y3C0 194 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 PKDREJQ9NTG1 2253 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 PIEZO2Q9H5I5 2752 aa11.79□□□□□ -0.52
TPM3-206ENST00000330188 B9A039 149 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 PLAUP00749 431 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 CD3EP07766 207 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 C11orf42Q8N5U0 333 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 SPTBN2O15020 2390 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 A0A1W2PN81 502 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 OR5G3P0C626 314 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 AREGP15514 252 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 ACTL10Q5JWF8 245 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 TGIF2LXQ8IUE1 241 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 PNKDQ8N490 385 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 CACNG8Q8WXS5 425 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 ZNF503Q96F45 646 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 IMMP2LQ96T52 175 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 ZNF430Q9H8G1 570 aaPredicted RBP11.78□□□□□ -0.52
TPM3-206ENST00000330188 ARL2-SNX15V9GYD0 113 aa11.78□□□□□ -0.52
TPM3-206ENST00000330188 ADGRG4Q8IZF6 3080 aa11.77□□□□□ -0.52
TPM3-206ENST00000330188 MDFIC2A0A1B0GVS7 189 aa11.77□□□□□ -0.52
TPM3-206ENST00000330188 LINC00587B1AMM8 73 aa11.77□□□□□ -0.52
TPM3-206ENST00000330188 IL3RAP26951 378 aa11.77□□□□□ -0.52
TPM3-206ENST00000330188 GPX4P36969 197 aaPredicted RBP11.77□□□□□ -0.52
TPM3-206ENST00000330188 LCN2P80188 198 aa11.77□□□□□ -0.52
TPM3-206ENST00000330188 WT1-ASQ06250 92 aa11.77□□□□□ -0.52
TPM3-206ENST00000330188 PSG5Q15238 335 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms