RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 OR4A8P0C604 315 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 PRNTQ86SH4 94 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 ZNF738Q8NE65 137 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 GGTLC1Q9BX51 225 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 KIF26AQ9ULI4 1882 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-201ENST00000323668 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.28□□□□□ -0.44
TCOF1-201ENST00000323668 IGHV2-70P01814 119 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 OR52E5Q8NH55 327 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 RBM14Q96PK6 669 aaKnown RBP12.28□□□□□ -0.44
TCOF1-201ENST00000323668 MRPL37Q9BZE1 423 aaKnown RBP12.28□□□□□ -0.44
TCOF1-201ENST00000323668 WNK2Q9Y3S1 2297 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 LY6G6EA0A0G2JKS1 128 aa12.27□□□□□ -0.44
TCOF1-201ENST00000323668 CLEC3BP05452 202 aa12.27□□□□□ -0.44
TCOF1-201ENST00000323668 FCER1GP30273 86 aa12.27□□□□□ -0.44
TCOF1-201ENST00000323668 GBGT1Q8N5D6 347 aa12.27□□□□□ -0.44
TCOF1-201ENST00000323668 U3KQA8 63 aa12.27□□□□□ -0.44
TCOF1-201ENST00000323668 FAM87AP0C7U9 286 aa12.27□□□□□ -0.44
TCOF1-201ENST00000323668 FTH1P19P0C7X4 201 aa12.27□□□□□ -0.44
TCOF1-201ENST00000323668 C5orf17Q8NAS9 161 aa12.27□□□□□ -0.44
TCOF1-201ENST00000323668 FAM122AQ96E09 287 aa12.27□□□□□ -0.44
TCOF1-201ENST00000323668 MBNL3Q9NUK0 354 aaKnown RBP12.27□□□□□ -0.44
TCOF1-201ENST00000323668 ZNF318Q5VUA4 2279 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 FAM157AC9JC47 383 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 LEPROTL1O95214 131 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 TIMP3P35625 211 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 DERL1Q9BUN8 251 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 ACACAQ13085 2346 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 PPIHO43447 177 aaKnown RBP12.27□□□□□ -0.45
TCOF1-201ENST00000323668 NDUFS6O75380 124 aaKnown RBP12.27□□□□□ -0.45
TCOF1-201ENST00000323668 PFN1P07737 140 aaKnown RBP12.27□□□□□ -0.45
TCOF1-201ENST00000323668 RPL11P62913 178 aaKnown RBP12.27□□□□□ -0.45
TCOF1-201ENST00000323668 ATOH7Q8N100 152 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 FAM216BQ8N7L0 139 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 PRR7Q8TB68 274 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 CACNG8Q8WXS5 425 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 TMEM186Q96B77 213 aa12.27□□□□□ -0.45
TCOF1-201ENST00000323668 TMEM177Q53S58 311 aa12.26□□□□□ -0.45
TCOF1-201ENST00000323668 DNLZQ5SXM8 178 aa12.26□□□□□ -0.45
TCOF1-201ENST00000323668 SAA2-SAA4A0A096LPE2 208 aa12.26□□□□□ -0.45
TCOF1-201ENST00000323668 SAA2P0DJI9 122 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-201ENST00000323668 MMDQ15546 238 aa12.26□□□□□ -0.45
TCOF1-201ENST00000323668 C14orf144Q96I85 54 aa12.26□□□□□ -0.45
TCOF1-201ENST00000323668 SCNM1Q9BWG6 230 aa12.26□□□□□ -0.45
TCOF1-201ENST00000323668 ZNF71Q9NQZ8 489 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-201ENST00000323668 ABCA1O95477 2261 aa12.26□□□□□ -0.45
TCOF1-201ENST00000323668 MIEN1Q9BRT3 115 aa12.26□□□□□ -0.45
TCOF1-201ENST00000323668 RNASE7Q9H1E1 156 aaKnown RBP12.26□□□□□ -0.45
TCOF1-201ENST00000323668 LINC00473A8K010 186 aa12.26□□□□□ -0.45
TCOF1-201ENST00000323668 TM4SF5O14894 197 aa12.26□□□□□ -0.45
TCOF1-201ENST00000323668 IGKV1-39P01597 117 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 IGKV1D-39P04432 117 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 RAB1CQ92928 201 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 PGLYRP4Q96LB8 373 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 REG1AP05451 166 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 Q6ZSR3 168 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 OR9G1Q8NH87 305 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 LTBP2Q14767 1821 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 GZMBP10144 247 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 LGALS7P47929 136 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 KRTCAP3Q53RY4 240 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 COQ2Q96H96 371 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 A0A1W2PRD5 423 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 A0A1W2PRF3 423 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 A0A1W2PRM7 423 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 UPK2O00526 184 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 ACTL10Q5JWF8 245 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 Q8NFD4 153 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 OSTCQ9NRP0 149 aa12.25□□□□□ -0.45
TCOF1-201ENST00000323668 C15orf62A8K5M9 175 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 SRRM5B3KS81 715 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 BMPR1BO00238 502 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 LINC00205P59089 165 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 ZNF726P1Q15940 193 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 SSX8Q7RTT4 187 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 LINC00305Q7Z4B0 112 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 WNT10AQ9GZT5 417 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 CHODLQ9H9P2 273 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 NRN1Q9NPD7 142 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 IFITM10A6NMD0 228 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 TBR1Q16650 682 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 TMEM256Q8N2U0 113 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 BEND2Q8NDZ0 799 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 NBASA2RRP1 2371 aa12.24□□□□□ -0.45
TCOF1-201ENST00000323668 TMSB15BA0A087X1C1 80 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 H3BTX0 84 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-201ENST00000323668 NBEAP1P0C6P0 100 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 BPIFA4PQ86YQ2 179 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 CDC42EP3Q9UKI2 254 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 AKAP6Q13023 2319 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 PEX7O00628 323 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 DKK1O94907 266 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 FAM19A2Q8N3H0 131 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 ZNF664Q8N3J9 261 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 OR8B3Q8NGG8 313 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 GRAMD2BQ96HH9 432 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 OR8B2Q96RD0 313 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 PCNX3Q9H6A9 2034 aa12.23□□□□□ -0.45
TCOF1-201ENST00000323668 A0A1W2PRE2 83 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms