RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TMEM8BA6NDV4 472 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 PEX7O00628 323 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 CXCL13O43927 109 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 CCL20P78556 96 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 MEF2CQ06413 473 aaPredicted RBP6□□□□□ -1.45
SMC1A-201ENST00000322213 MORN2Q502X0 79 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF714Q96N38 554 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 GPR35Q9HC97 309 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 TMEM160Q9NX00 188 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 F5H697 171 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 ZG16O60844 167 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 PPP1R17O96001 155 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 IL11P20809 199 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 SPANXN1Q5VSR9 72 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 KLF13Q9Y2Y9 288 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-201ENST00000322213 M0R1B8 84 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 SRD5A2P31213 254 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 DLX4Q92988 240 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-201ENST00000322213 PRDM14Q9GZV8 571 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF716A6NP11 495 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 GPHA2Q96T91 129 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 NRTNQ99748 197 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 SPTY2D1-AS1A0A0U1RR47 76 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 GNB2P62879 340 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 KIR3DS1Q14943 382 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 SRSF7Q16629 238 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMC1A-201ENST00000322213 ASCL5Q7RTU5 278 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 RPL8P62917 257 aaKnown RBP5.99□□□□□ -1.45
SMC1A-201ENST00000322213 CIRBPQ14011 172 aaKnown RBP5.99□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF788Q6ZQV5 615 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 TIMD4Q96H15 378 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 PSG9Q00887 426 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 MOB3BQ86TA1 216 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 TMEM256Q8N2U0 113 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 FAM222BQ8WU58 562 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 PLPPR2Q96GM1 343 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF488Q96MN9 340 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 RSPO3Q9BXY4 272 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-201ENST00000322213 LOC105371242A0A075B767 164 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 PPIAL4CA0A0B4J2A2 164 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 PPIAL4GP0DN37 164 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 DRD3P35462 400 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 SLC25A47Q6Q0C1 308 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 STPG4Q8N801 248 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 OR52E5Q8NH55 327 aa5.99□□□□□ -1.45
SMC1A-201ENST00000322213 CGAP01215 116 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 SPINK8P0C7L1 97 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 SSBP3Q9BWW4 388 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-201ENST00000322213 FAM90A9PA6NNJ1 464 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 SNAI2O43623 268 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 POU2F2P09086 479 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 GPR6P46095 362 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-201ENST00000322213 RBPJQ06330 500 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 CD300EQ496F6 205 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-201ENST00000322213 LRRC29Q8WV35 223 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 BADQ92934 168 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 RABAC1Q9UI14 185 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 HILPDAQ9Y5L2 63 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 PTGDSP41222 190 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 GAGE2BQ13066 116 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 MST1LQ2TV78 715 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 GAGE2EQ4V326 116 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 SCNM1Q9BWG6 230 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 GAGE2DQ9UEU5 116 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 TMEM229AB2RXF0 380 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 DNAL4O96015 105 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 LIFP15018 202 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 PTCRAQ6ISU1 281 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-201ENST00000322213 C6orf15Q6UXA7 325 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-201ENST00000322213 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 EAF1Q96JC9 268 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-201ENST00000322213 NHP2Q9NX24 153 aaKnown RBP5.98□□□□□ -1.45
SMC1A-201ENST00000322213 A0A087X0K7 114 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 F8W1H4 67 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 CD5LO43866 347 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 RAMP3O60896 148 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 KLRB1Q12918 225 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF585BQ52M93 769 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 LHFPL1Q86WI0 220 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 FAM89BQ8N5H3 189 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 PROCRQ9UNN8 238 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 OR2H2O95918 312 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 TMEM95Q3KNT9 176 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 ALKBH6Q3KRA9 238 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 ZDHHC16Q969W1 377 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 TRAV8-6A0A0B4J262 113 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 SYS1-DBNDD2H3BUS1 97 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 C4orf51C9J302 202 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 ITGBL1O95965 494 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-201ENST00000322213 TM4SF20Q53R12 229 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 CITED2Q99967 270 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-201ENST00000322213 LY96Q9Y6Y9 160 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 A0A0C4DFX4 3053 aa5.98□□□□□ -1.45
SMC1A-201ENST00000322213 GPX1P07203 203 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 ATP5G3P48201 142 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 DLX6P56179 175 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 C2orf83Q53S99 150 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 LINC00696Q6ZRV3 163 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 ONECUT1Q9UBC0 465 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 CENPFP49454 3210 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms