RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ERVFRD-1P60508 538 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 SLC35B1P78383 322 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 PRSS8Q16651 343 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 HCP5Q6MZN7 132 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 BAIAP2L2Q6UXY1 529 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 TRAPPC6BQ86SZ2 158 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 ABHD12Q8N2K0 398 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 MRPL30Q8TCC3 161 aaKnown RBP6.65□□□□□ -1.35
CHD6-201ENST00000309279 TMPRSS5Q9H3S3 457 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 PPDPFQ9H3Y8 114 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 SPANXB1Q9NS25 103 aaPredicted RBP6.65□□□□□ -1.35
CHD6-201ENST00000309279 RSL24D1Q9UHA3 163 aaKnown RBP6.65□□□□□ -1.35
CHD6-201ENST00000309279 JMJD1CQ15652 2540 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 TRAV40A0A0B4J280 105 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 H3BS24 57 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 I3L521 148 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 MMP23AO75900 390 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 RLN2P04090 185 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 FAM157CP0CG43 387 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 IGHV4-38-2P0DP08 117 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 HIST1H1BP16401 226 aaKnown RBP6.64□□□□□ -1.35
CHD6-201ENST00000309279 HIST1H1DP16402 221 aaKnown RBP6.64□□□□□ -1.35
CHD6-201ENST00000309279 GNB3P16520 340 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 RCC1P18754 421 aaPredicted RBP6.64□□□□□ -1.35
CHD6-201ENST00000309279 UBE2E1P51965 193 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 UBE2NLQ5JXB2 153 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 OLFML2AQ68BL7 652 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 ZNF880Q6PDB4 577 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 Q6ZPA2 131 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 C9orf139Q6ZV77 190 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 FAM19A1Q7Z5A9 133 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 SAMD12Q8N8I0 201 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 IL17DQ8TAD2 202 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 S100A16Q96FQ6 103 aaKnown RBP6.64□□□□□ -1.35
CHD6-201ENST00000309279 DUX3Q96PT4 197 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 SIGMAR1Q99720 223 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 HEXA-AS1Q9H8Q6 139 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 CALYQ9NYX4 217 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 AK3Q9UIJ7 227 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 TRAPPC2LQ9UL33 140 aa6.64□□□□□ -1.35
CHD6-201ENST00000309279 RCL1Q9Y2P8 373 aaKnown RBP6.64□□□□□ -1.35
CHD6-201ENST00000309279 TRAV39A0A0B4J263 110 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 C20orf202A1L168 122 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 C12orf77C9JDV5 145 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 GYPEP15421 78 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 SRD5A1P18405 259 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 CDK2P24941 298 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 SRP14P37108 136 aaKnown RBP6.63□□□□□ -1.35
CHD6-201ENST00000309279 DLX1P56177 255 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 GAGE5Q13069 117 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 GAGE6Q13070 117 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 ZNF260Q3ZCT1 412 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 OCIAD2Q56VL3 154 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 CMTM1Q8IZ96 169 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 OR11H6Q8NGC7 330 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 TOMM40LQ969M1 308 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 C20orf173Q96LM9 149 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 CMSS1Q9BQ75 279 aaKnown RBP6.63□□□□□ -1.35
CHD6-201ENST00000309279 SLIRPQ9GZT3 109 aaKnown RBP6.63□□□□□ -1.35
CHD6-201ENST00000309279 MAP1LC3AQ9H492 121 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 SIGLEC8Q9NYZ4 499 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 COMMD3Q9UBI1 195 aa6.63□□□□□ -1.35
CHD6-201ENST00000309279 IGHV1-69DA0A0B4J2H0 117 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 M0R143 59 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 OXTP01178 125 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 IGHV1-69P01742 117 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 EIF4EP06730 217 aaKnown RBP6.62□□□□□ -1.35
CHD6-201ENST00000309279 CD34P28906 385 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 SULT1A1P50225 295 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 SULT1A2P50226 295 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 TAS2R31P59538 309 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 HMGN3Q15651 99 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 SRSF7Q16629 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
CHD6-201ENST00000309279 LRRC75BQ2VPJ9 315 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 TMEM97Q5BJF2 176 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 ZNF782Q6ZMW2 699 aaPredicted RBP6.62□□□□□ -1.35
CHD6-201ENST00000309279 MOB1BQ7L9L4 216 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 RFESDQ8TAC1 157 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 ARL11Q969Q4 196 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 RPUSD4Q96CM3 377 aaKnown RBP6.62□□□□□ -1.35
CHD6-201ENST00000309279 MRAP2Q96G30 205 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 RCHY1Q96PM5 261 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 HDHD3Q9BSH5 251 aaPredicted RBP6.62□□□□□ -1.35
CHD6-201ENST00000309279 TMEM133Q9H2Q1 129 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 TAF9BQ9HBM6 251 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 IDI2-AS1Q9NZ38 188 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 ZFP30Q9Y2G7 519 aa6.62□□□□□ -1.35
CHD6-201ENST00000309279 TRAV18A0A075B6X5 111 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 IGHV2-26A0A0B4J1V2 119 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 A0A1B0GU03 582 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 ODF3BA8MYP8 253 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 F6UZH7 168 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 SPINT2O43291 252 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 HBZP02008 142 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 ELK1P19419 428 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 PVALBP20472 110 aaPredicted RBP6.61□□□□□ -1.35
CHD6-201ENST00000309279 LEPP41159 167 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 NKX2-1P43699 371 aaPredicted RBP6.61□□□□□ -1.35
CHD6-201ENST00000309279 PRB3Q04118 309 aaPredicted RBP6.61□□□□□ -1.35
CHD6-201ENST00000309279 KLRD1Q13241 179 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms