RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CMTM2Q8TAZ6 248 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 MS4A10Q96PG2 267 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 CDC42EP3Q9UKI2 254 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 KLK9Q9UKQ9 250 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 A0A096LNJ9 63 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 C15orf61A6NNL5 157 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 NPIPB6E9PJ23 425 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 MGST3O14880 152 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 OR5G3P0C626 314 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 OR5I1Q13606 314 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 SMIM21Q3B7S5 101 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 TIMM23BQ5SRD1 257 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 PATE2Q6UY27 113 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 ZNF833PQ6ZTB9 187 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 OR4A5Q8NH83 315 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 RNASE11Q8TAA1 199 aaKnown RBP4.41□□□□□ -1.7
VPS50-202ENST00000305866 UBALD1Q8TB05 177 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 SCGB1C1Q8TD33 95 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 DNAJC4Q9NNZ3 241 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 NRN1Q9NPD7 142 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 OSTCQ9NRP0 149 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 R4GN57 208 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 ADGRG4Q8IZF6 3080 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 E7EUB6 86 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 C17orf112F2Z3M2 114 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 ISLRO14498 428 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 TAX1BP3O14907 124 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 IGHV3-9P01782 118 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 CECR9P0C854 216 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 SSTR5P35346 364 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 RAB7AP51149 207 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 RPL31P62899 125 aaKnown RBP4.41□□□□□ -1.7
VPS50-202ENST00000305866 RPP30P78346 268 aaKnown RBP4.41□□□□□ -1.7
VPS50-202ENST00000305866 VWA1Q6PCB0 445 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 TOMM20LQ6UXN7 152 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 C2orf91Q6ZV80 131 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 SMIM12Q96EX1 92 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 ADTRPQ96IZ2 230 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 SLC35E1Q96K37 410 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 HSPB9Q9BQS6 159 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 CLEC7AQ9BXN2 247 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 OR2D2Q9H210 308 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 RAB9BQ9NP90 201 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 KLF12Q9Y4X4 402 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 C19orf71A6NCJ1 209 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 ZNF705GA8MUZ8 300 aaPredicted RBP4.41□□□□□ -1.7
VPS50-202ENST00000305866 TSPOP30536 169 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 THBS3P49746 956 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 PPOXP50336 477 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 SSBP2P81877 361 aaPredicted RBP4.41□□□□□ -1.7
VPS50-202ENST00000305866 MIC13Q5XKP0 118 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 OR8G2PQ6IF36 304 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 UFSP1Q6NVU6 142 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 MOB3BQ86TA1 216 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 C9orf106Q8NAJ2 232 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 RNF2Q99496 336 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 DCTN5Q9BTE1 182 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 ARRDC1-AS1Q9H2J1 176 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 TRAPPC2LQ9UL33 140 aa4.41□□□□□ -1.7
VPS50-202ENST00000305866 FAM166BA8MTA8 275 aa4.4□□□□□ -1.7
VPS50-202ENST00000305866 IGLV2-11P01706 119 aa4.4□□□□□ -1.7
VPS50-202ENST00000305866 MYOD1P15172 320 aa4.4□□□□□ -1.7
VPS50-202ENST00000305866 GLRXP35754 106 aa4.4□□□□□ -1.7
VPS50-202ENST00000305866 C2orf83Q53S99 150 aa4.4□□□□□ -1.7
VPS50-202ENST00000305866 MMD2Q8IY49 270 aa4.4□□□□□ -1.7
VPS50-202ENST00000305866 ALKBH7Q9BT30 221 aaPredicted RBP4.4□□□□□ -1.7
VPS50-202ENST00000305866 IDI2-AS1Q9NZ38 188 aa4.4□□□□□ -1.7
VPS50-202ENST00000305866 TBL2Q9Y4P3 447 aaKnown RBP4.4□□□□□ -1.7
VPS50-202ENST00000305866 COX11Q9Y6N1 276 aa4.4□□□□□ -1.7
VPS50-202ENST00000305866 TRBV6-1A0A0K0K1D8 114 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 ZNF324O75467 553 aaPredicted RBP4.4□□□□□ -1.71
VPS50-202ENST00000305866 CXorf1O96002 111 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 KRASP01116 189 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 IGLL1P15814 213 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 IGFBP2P18065 325 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 BMP5P22003 454 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 REG1BP48304 166 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 RPS20P60866 119 aaKnown RBP4.4□□□□□ -1.71
VPS50-202ENST00000305866 RPS16P62249 146 aaKnown RBP4.4□□□□□ -1.71
VPS50-202ENST00000305866 SPINK9Q5DT21 86 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 SLC25A48Q6ZT89 311 aaKnown RBP4.4□□□□□ -1.71
VPS50-202ENST00000305866 OR1L8Q8NGR8 309 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 BET1LQ9NYM9 111 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 LRBAP50851 2863 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 LINC01546A6NGU7 62 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 CCNOP22674 350 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 PRDX2P32119 198 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 DLX6P56179 175 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 PMP22Q01453 160 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 MEF2CQ06413 473 aaPredicted RBP4.4□□□□□ -1.71
VPS50-202ENST00000305866 ZNF816Q0VGE8 651 aaPredicted RBP4.4□□□□□ -1.71
VPS50-202ENST00000305866 HES3Q5TGS1 186 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 RASL11AQ6T310 242 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 Q6ZS92 163 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 MIR17HGQ75NE6 70 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 VASH2Q86V25 355 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 OR10P1Q8NGE3 313 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 PPP1R35Q8TAP8 253 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 RITA1Q96K30 269 aa4.4□□□□□ -1.71
VPS50-202ENST00000305866 RNASE7Q9H1E1 156 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms