RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 FAM90A16PA6NEW6 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A20PA6NIJ5 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A8PA6NJQ4 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 A6NJY4 79 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A7PA6NKC0 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A22PA8MWA6 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A12PA8MX19 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A5PA8MXJ8 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A23PA8MXZ1 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 CD55P08174 381 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A15PP0C7V4 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A13PP0C7W8 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A14PP0C7W9 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A24PP0C7X0 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 KIR2DS2P43631 304 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 KHDC1LQ5JSQ8 128 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM201AQ5SY85 155 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 VSTM2AQ8TAG5 236 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 PLPPR1Q8TBJ4 325 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 BEX4Q9NWD9 120 aaPredicted RBP10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 MGPP08493 103 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 CSRP1P21291 193 aaKnown RBP10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 LRRC10Q5BKY1 277 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 INO80CQ6PI98 192 aaPredicted RBP10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 PSMG3Q9BT73 122 aaPredicted RBP10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 LIME1Q9H400 295 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 TMEM265A0A087WTH1 108 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 C9orf172C9J069 976 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 SPANXN1Q5VSR9 72 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 AMMECR1LQ6DCA0 310 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 RASL11BQ9BPW5 248 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 HSPB7Q9UBY9 170 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 SLC25A17O43808 307 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 LHX2P50458 406 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 DNM1P46Q6ZS02 220 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 ZNRF1Q8ND25 227 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 OR1L8Q8NGR8 309 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 PCNX2A6NKB5 2137 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 ZFP36L1Q07352 338 aaKnown RBP10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 SEMA5BQ9P283 1151 aa10.57□□□□□ -0.72
SLC6A1-201ENST00000287766 SCO2A0A1W2PP80 73 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 C12orf77C9JDV5 145 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 LIPFP07098 398 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 MBNL2Q5VZF2 373 aaKnown RBP10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM169BQ8N8A8 192 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 OR51B2Q9Y5P1 312 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 SNCGO76070 127 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 SCGB1A1P11684 91 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 ADMP35318 185 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 PSG7Q13046 419 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 LINC00596Q86U02 117 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 WFDC3Q8IUB2 231 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 IL36BQ9NZH7 164 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 TRBV9A0A0B4J1U6 114 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 TRAV24A0A0B4J272 114 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 C17orf98A8MV24 154 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 HYPMO75409 117 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 TNFRSF1AP19438 455 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 GCHFRP30047 84 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 NTF4P34130 210 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 RSPO1Q2MKA7 263 aaPredicted RBP10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 TMEM256Q8N2U0 113 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 CCL13Q99616 98 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 KIAA1549LQ6ZVL6 1849 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 MARCH11A6NNE9 402 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 CEACAM18A8MTB9 384 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 NAPSAO96009 420 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 MPV17P39210 176 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 FDCSPQ8NFU4 85 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 TIMD4Q96H15 378 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 PKIBQ9C010 78 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 VSIRQ9H7M9 311 aa10.56□□□□□ -0.72
SLC6A1-201ENST00000287766 TGFAP01135 160 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 HTN1P15515 57 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 TPTE2P1Q5T6R2 138 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 HCP5Q6MZN7 132 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 BEND2Q8NDZ0 799 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 OR8G5Q8NG78 346 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 ITLN1Q8WWA0 313 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 TRGV8A0A0C4DH27 118 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 C8orf88P0DMB2 117 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 MST1LQ2TV78 715 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 SAXO1Q8IYX7 474 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 NUP210Q8TEM1 1887 aaPredicted RBP10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 ODAMA1E959 279 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 TMEM210A6NLX4 147 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 K7N7A8 449 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 LINC00614P0C842 121 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 ZNF645Q8N7E2 425 aa10.55□□□□□ -0.72
SLC6A1-201ENST00000287766 CGAP01215 116 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 GNB2P62879 340 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 RPL39P5Q59GN2 51 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 C1orf194Q5T5A4 169 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 TMEM171Q8WVE6 324 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 USF3Q68DE3 2245 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 TMEM189A5PLL7 270 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 RAMP3O60896 148 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 TNFSF13O75888 250 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 IL4P05112 153 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 TFF3Q07654 80 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms