RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 K7EPK0 472 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 UPK1AO00322 258 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 TP53I11O14683 189 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 SUPT7LO94864 414 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 KCNK2O95069 426 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 IGF2P01344 180 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 SERPINE1P05121 402 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 CTLA4P16410 223 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 MT3P25713 68 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 APLNRP35414 380 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 CTBP2P56545 445 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 PIGPP57054 158 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 KLF3P57682 345 aaPredicted RBP3.43□□□□□ -1.86
CD44-202ENST00000278385 GNG2P59768 71 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 RPS20P60866 119 aaKnown RBP3.43□□□□□ -1.86
CD44-202ENST00000278385 NCALDP61601 193 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 RRAS2P62070 204 aaPredicted RBP3.43□□□□□ -1.86
CD44-202ENST00000278385 FABP5Q01469 135 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 ZNF791Q3KP31 576 aaPredicted RBP3.43□□□□□ -1.86
CD44-202ENST00000278385 FBXL19-AS1Q494R0 122 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 C6orf99Q4VX62 202 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 ATP6AP1LQ52LC2 224 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 ZNF678Q5SXM1 525 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 REG3GQ6UW15 175 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 C16orf47Q6ZP98 133 aaPredicted RBP3.43□□□□□ -1.86
CD44-202ENST00000278385 Q6ZRU5 148 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 RNF175Q8N4F7 328 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 GDPD1Q8N9F7 314 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 CSNK1G2-AS1Q8NCQ2 148 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 OR5K1Q8NHB7 308 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 FAM57AQ8TBR7 257 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 C14orf144Q96I85 54 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 SLC35E1Q96K37 410 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 ZNF382Q96SR6 550 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 DOHHQ9BU89 302 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 PBDC1Q9BVG4 233 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 MND1Q9BWT6 205 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 CLEC7AQ9BXN2 247 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 TMEM222Q9H0R3 208 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 ZNF556Q9HAH1 456 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 HMG20AQ9NP66 347 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 TMEM216Q9P0N5 145 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 RBM12B-AS1Q9P1G2 102 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 DPM3Q9P2X0 92 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 HSPB8Q9UJY1 196 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 BOKQ9UMX3 212 aaPredicted RBP3.43□□□□□ -1.86
CD44-202ENST00000278385 RBM7Q9Y580 266 aaKnown RBP3.43□□□□□ -1.86
CD44-202ENST00000278385 SPTA1P02549 2419 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 MED13Q9UHV7 2174 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 TRGV5A0A0B4J1U4 118 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 TMEM189A5PLL7 270 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 PINLYPA6NC86 204 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 MPTX1A8MV57 137 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 KLLNB2CW77 178 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 SMIM1B2RUZ4 78 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 J3KT08 172 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 LMX1BO60663 402 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 ZNF780AO75290 641 aaPredicted RBP3.42□□□□□ -1.86
CD44-202ENST00000278385 IFNA4P05014 189 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 S100A8P05109 93 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 DBIP07108 87 aaKnown RBP3.42□□□□□ -1.86
CD44-202ENST00000278385 LGALS1P09382 135 aaKnown RBP3.42□□□□□ -1.86
CD44-202ENST00000278385 CECR9P0C854 216 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 UBBP0CG47 229 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 IGHV3-43DP0DP04 118 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 CPMP14384 443 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 COX6B1P14854 86 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 ZNF25P17030 456 aaPredicted RBP3.42□□□□□ -1.86
CD44-202ENST00000278385 CCL1P22362 96 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 GADD45AP24522 165 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 IL2RGP31785 369 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 MDH2P40926 338 aaKnown RBP3.42□□□□□ -1.86
CD44-202ENST00000278385 SNRPD2P62316 118 aaKnown RBP3.42□□□□□ -1.86
CD44-202ENST00000278385 ARFRP1Q13795 201 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 FCN2Q15485 313 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 ZNF404Q494X3 552 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 RNASE10Q5GAN6 216 aaKnown RBP3.42□□□□□ -1.86
CD44-202ENST00000278385 OR2B11Q5JQS5 317 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 SLC48A1Q6P1K1 146 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 FBXW12Q6X9E4 464 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 Q6ZTC4 211 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 COMMD6Q7Z4G1 85 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 ZNF615Q8N8J6 731 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 ZIC4Q8N9L1 334 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 RXFP4Q8TDU9 374 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 GPR119Q8TDV5 335 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 THEM6Q8WUY1 208 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 CANT1Q8WVQ1 401 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 PTX4Q96A99 478 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 GPR146Q96CH1 333 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 PLEKHB2Q96CS7 222 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 FXYD5Q96DB9 178 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 NEURL3Q96EH8 262 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 SLC25A44Q96H78 314 aaPredicted RBP3.42□□□□□ -1.86
CD44-202ENST00000278385 OR7D2Q96RA2 312 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 TMEM70Q9BUB7 260 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 TTTY12Q9BZ98 90 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 TBL1XR1Q9BZK7 514 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 CHST6Q9GZX3 395 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 CXorf21Q9HAI6 301 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms