RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 MRPL30Q8TCC3 161 aaKnown RBP2.39□□□□□ -2.03
HERC4-201ENST00000277817 IL22RA2Q969J5 263 aa2.39□□□□□ -2.03
HERC4-201ENST00000277817 SIGLEC12Q96PQ1 595 aa2.39□□□□□ -2.03
HERC4-201ENST00000277817 TP53RKQ96S44 253 aa2.39□□□□□ -2.03
HERC4-201ENST00000277817 RTBDNQ9BSG5 229 aaPredicted RBP2.39□□□□□ -2.03
HERC4-201ENST00000277817 OPN3Q9H1Y3 402 aaPredicted RBP2.39□□□□□ -2.03
HERC4-201ENST00000277817 MYOZ1Q9NP98 299 aaPredicted RBP2.39□□□□□ -2.03
HERC4-201ENST00000277817 ZNF586Q9NXT0 402 aa2.39□□□□□ -2.03
HERC4-201ENST00000277817 TIMM9Q9Y5J7 89 aa2.39□□□□□ -2.03
HERC4-201ENST00000277817 UBR5O95071 2799 aaPredicted RBP2.39□□□□□ -2.03
HERC4-201ENST00000277817 DYNC2H1Q8NCM8 4307 aaKnown RBP2.39□□□□□ -2.03
HERC4-201ENST00000277817 TRAV14DV4A0A0A6YYC5 116 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 IGKV1-9A0A0C4DH69 117 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 DUXBA0A1W2PPF3 345 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 SEC14L6B5MCN3 397 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 H0YL77 283 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 RAMP3O60896 148 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 NPIPB7O75200 414 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 CA11O75493 328 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 HSBP1O75506 76 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 TMEM187Q14656 261 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 C10orf128Q5T292 105 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 TOMM20LQ6UXN7 152 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 C5orf24Q7Z6I8 188 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 OR10A7Q8NGE5 316 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 TMEM54Q969K7 222 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 RPEQ96AT9 228 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 OR4C12Q96R67 309 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 GAL3ST2Q9H3Q3 398 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 ZNF665Q9H7R5 613 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 PNRC2Q9NPJ4 139 aaKnown RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 C11orf21Q9P2W6 132 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 RNF7Q9UBF6 113 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 FUT9Q9Y231 359 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 ARL2-SNX15V9GYD0 113 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 TRBV9A0A0B4J1U6 114 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 IGHV3-21A0A0B4J1V1 117 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 ZNF503-AS2A6NEH8 195 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 H0Y980 276 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 SLC31A2O15432 143 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 PPIHO43447 177 aaKnown RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 PITX3O75364 302 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 TRGC2P03986 189 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 SLC25A5P05141 298 aaKnown RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 FAM157CP0CG43 387 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 CSRP1P21291 193 aaKnown RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 S100A7P31151 101 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 TPPP2P59282 170 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 RND3P61587 244 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 GNB2P62879 340 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 VAMP3Q15836 100 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 KHDC3LQ587J8 217 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 LY6G6FQ5SQ64 297 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 UTF1Q5T230 341 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 OR10G8Q8NGN5 311 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 LEAP2Q969E1 77 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 IMMP1LQ96LU5 166 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 CCL13Q99616 98 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 TIMP4Q99727 224 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 PARD6AQ9NPB6 346 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 FKBP11Q9NYL4 201 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 FOXJ2Q9P0K8 574 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 WIPI2Q9Y4P8 454 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 NPTNQ9Y639 398 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 PHF3Q92576 2039 aaKnown RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 TRAV38-1A0A0B4J264 116 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 A8MXK9 166 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 B4DEV8 164 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 SYNGR3O43761 229 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 FN1P02751 2386 aaKnown RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 BCL2P10415 239 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 G0S2P27469 103 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 MPV17P39210 176 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 RPL29P47914 159 aaKnown RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 ZNF415Q09FC8 603 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 OR5I1Q13606 314 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 TNXAQ16473 311 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 Q6ZRM9 215 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 SSX7Q7RTT5 188 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 ASCL5Q7RTU5 278 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 LINC00596Q86U02 117 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 TGIF2LXQ8IUE1 241 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 H1FOOQ8IZA3 346 aaPredicted RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 VKORC1L1Q8N0U8 176 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 OR1L4Q8NGR5 311 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 OR1B1Q8NGR6 318 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 C8orf46Q8TAG6 207 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 KLF14Q8TD94 323 aaPredicted RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 PACRGQ96M98 296 aaPredicted RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 OR2V2Q96R30 315 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 CITED1Q99966 193 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 RNF126Q9BV68 326 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 NPFFR1Q9GZQ6 430 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 LYRM2Q9NU23 88 aaPredicted RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 CENPFP49454 3210 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 IGKV1D-8A0A087WSZ0 117 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 CTXND1A0A1B0GTU2 59 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 TMEM210A6NLX4 147 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 DBX1A6NMT0 343 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 RPL31P62899 125 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms