RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 CEACAM3P40198 252 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 ARL16Q0P5N6 197 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 Q6ZS92 163 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 P2RX4Q99571 388 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 USP34Q70CQ2 3546 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 IGHV1-69-2A0A0G2JMI3 117 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.92□□□□□ -0.5
TMEM47-201ENST00000275954 LINC00473A8K010 186 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 PRB4P10163 310 aaPredicted RBP11.92□□□□□ -0.5
TMEM47-201ENST00000275954 AGAP20933 346 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 ZNF137PP52743 207 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 MFAP2P55001 183 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 FAM90A1Q86YD7 464 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 OR2D3Q8NGH3 330 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 MRPL20Q9BYC9 149 aaKnown RBP11.92□□□□□ -0.5
TMEM47-201ENST00000275954 WASHC3Q9Y3C0 194 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 DMXL2Q8TDJ6 3036 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 CGAP01215 116 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 MYOD1P15172 320 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 RNF138Q8WVD3 245 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 COL12A1Q99715 3063 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 PLSCR4Q9NRQ2 329 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 TRAV3A0A0B4J244 114 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 C17orf100A8MU93 164 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 IL6RP08887 468 aaPredicted RBP11.91□□□□□ -0.5
TMEM47-201ENST00000275954 RPP25LQ8N5L8 163 aaKnown RBP11.91□□□□□ -0.5
TMEM47-201ENST00000275954 OR4C13Q8NGP0 309 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 DMXL1Q9Y485 3027 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 GRIFINA4D1Z8 144 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 SRRM5B3KS81 715 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 IGLV3-1P01715 115 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 WDR86Q86TI4 376 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 EAF1Q96JC9 268 aaPredicted RBP11.91□□□□□ -0.5
TMEM47-201ENST00000275954 COA4Q9NYJ1 87 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 RNF115Q9Y4L5 304 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 PPIAL4CA0A0B4J2A2 164 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 SLC17A3O00476 420 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 PPIAL4GP0DN37 164 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 ATP5J2P56134 94 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 IQCJQ1A5X6 159 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 ZNF474Q6S9Z5 364 aaPredicted RBP11.91□□□□□ -0.5
TMEM47-201ENST00000275954 SSX7Q7RTT5 188 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 WDR31Q8NA23 367 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
TMEM47-201ENST00000275954 AAMDCQ9H7C9 122 aa11.91□□□□□ -0.5
TMEM47-201ENST00000275954 A0A087X0M5 115 aa11.9□□□□□ -0.5
TMEM47-201ENST00000275954 A0A1B0GX30 115 aa11.9□□□□□ -0.5
TMEM47-201ENST00000275954 C20orf202A1L168 122 aa11.9□□□□□ -0.5
TMEM47-201ENST00000275954 IGHV1-46P01743 117 aa11.9□□□□□ -0.5
TMEM47-201ENST00000275954 CD24P25063 80 aa11.9□□□□□ -0.5
TMEM47-201ENST00000275954 GRNP28799 593 aaKnown RBP11.9□□□□□ -0.5
TMEM47-201ENST00000275954 AMMECR1Q9Y4X0 333 aaPredicted RBP11.9□□□□□ -0.5
TMEM47-201ENST00000275954 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
TMEM47-201ENST00000275954 PGPA6NDG6 321 aa11.9□□□□□ -0.5
TMEM47-201ENST00000275954 GCHFRP30047 84 aa11.9□□□□□ -0.5
TMEM47-201ENST00000275954 PNKDQ8N490 385 aa11.9□□□□□ -0.5
TMEM47-201ENST00000275954 MAPK1IP1LQ8NDC0 245 aa11.9□□□□□ -0.5
TMEM47-201ENST00000275954 A0A0G2JNJ9 132 aa11.9□□□□□ -0.51
TMEM47-201ENST00000275954 USF1P22415 310 aaPredicted RBP11.9□□□□□ -0.51
TMEM47-201ENST00000275954 ZNF585BQ52M93 769 aa11.9□□□□□ -0.51
TMEM47-201ENST00000275954 C10orf55Q5SWW7 151 aa11.9□□□□□ -0.51
TMEM47-201ENST00000275954 OR9G1Q8NH87 305 aa11.9□□□□□ -0.51
TMEM47-201ENST00000275954 DIRC2Q96SL1 478 aa11.9□□□□□ -0.51
TMEM47-201ENST00000275954 ZNRD1Q9P1U0 126 aa11.9□□□□□ -0.51
TMEM47-201ENST00000275954 Q9UFV3 132 aa11.9□□□□□ -0.51
TMEM47-201ENST00000275954 ANAPC10Q9UM13 185 aa11.9□□□□□ -0.51
TMEM47-201ENST00000275954 SLC25A15Q9Y619 301 aa11.9□□□□□ -0.51
TMEM47-201ENST00000275954 ELOA3CA0A087WX78 387 aaPredicted RBP11.89□□□□□ -0.51
TMEM47-201ENST00000275954 SCO2A0A1W2PP80 73 aa11.89□□□□□ -0.51
TMEM47-201ENST00000275954 COLCA2A8K830 154 aa11.89□□□□□ -0.51
TMEM47-201ENST00000275954 GPR6P46095 362 aaPredicted RBP11.89□□□□□ -0.51
TMEM47-201ENST00000275954 ECSCRQ19T08 205 aa11.89□□□□□ -0.51
TMEM47-201ENST00000275954 TMEM250H0YL14 139 aa11.89□□□□□ -0.51
TMEM47-201ENST00000275954 SLC31A2O15432 143 aa11.89□□□□□ -0.51
TMEM47-201ENST00000275954 HYPMO75409 117 aa11.89□□□□□ -0.51
TMEM47-201ENST00000275954 NOL4LQ96MY1 436 aaPredicted RBP11.89□□□□□ -0.51
TMEM47-201ENST00000275954 DNAJC4Q9NNZ3 241 aa11.89□□□□□ -0.51
TMEM47-201ENST00000275954 DCAF16Q9NXF7 216 aa11.89□□□□□ -0.51
TMEM47-201ENST00000275954 MC5RP33032 325 aa11.89□□□□□ -0.51
TMEM47-201ENST00000275954 VAMP8Q9BV40 100 aa11.89□□□□□ -0.51
TMEM47-201ENST00000275954 HLA-DRB5Q30154 266 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 FGF23Q9GZV9 251 aaPredicted RBP11.88□□□□□ -0.51
TMEM47-201ENST00000275954 HSPB7Q9UBY9 170 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 YPEL1O60688 119 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 MIR17HGQ75NE6 70 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 LHFPL4Q7Z7J7 247 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 OR10W1Q8NGF6 305 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 YPEL2Q96QA6 119 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 FBXL15Q9H469 300 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 SDF2L1Q9HCN8 221 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 PAM16Q9Y3D7 125 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 J3KRW8 73 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 C8orf88P0DMB2 117 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 HIST1H1BP16401 226 aaKnown RBP11.88□□□□□ -0.51
TMEM47-201ENST00000275954 CBLN1P23435 193 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 CYP2G1PQ6ZSU1 146 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 SMIM15Q7Z3B0 74 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 MMD2Q8IY49 270 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 CHRDL1Q9BU40 450 aa11.88□□□□□ -0.51
TMEM47-201ENST00000275954 IGKV1D-17A0A075B6S4 117 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms