RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 TM2D3Q9BRN9 247 aa10.89□□□□□ -0.67
HMGN3-201ENST00000275036 C6orf62Q9GZU0 229 aaPredicted RBP10.89□□□□□ -0.67
HMGN3-201ENST00000275036 FKBP11Q9NYL4 201 aa10.89□□□□□ -0.67
HMGN3-201ENST00000275036 THYN1Q9P016 225 aa10.89□□□□□ -0.67
HMGN3-201ENST00000275036 IGHV3-35A0A0C4DH35 117 aa10.88□□□□□ -0.67
HMGN3-201ENST00000275036 A8MWP6 167 aa10.88□□□□□ -0.67
HMGN3-201ENST00000275036 F8W735 103 aaPredicted RBP10.88□□□□□ -0.67
HMGN3-201ENST00000275036 K7EIM0 57 aa10.88□□□□□ -0.67
HMGN3-201ENST00000275036 CTDSPLO15194 276 aa10.88□□□□□ -0.67
HMGN3-201ENST00000275036 P0C879 139 aa10.88□□□□□ -0.67
HMGN3-201ENST00000275036 CBLN1P23435 193 aa10.88□□□□□ -0.67
HMGN3-201ENST00000275036 SP6Q3SY56 376 aa10.88□□□□□ -0.67
HMGN3-201ENST00000275036 OR4C16Q8NGL9 310 aa10.88□□□□□ -0.67
HMGN3-201ENST00000275036 CEPT1Q9Y6K0 416 aa10.88□□□□□ -0.67
HMGN3-201ENST00000275036 C3orf85A0A1B0GTC6 90 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 ZNF320A2RRD8 509 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 OR2T8A6NH00 312 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 TGOLN2O43493 480 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 PRCDQ00LT1 54 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 FAM106AQ4KMX7 169 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 TM4SF20Q53R12 229 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 SGPP2Q8IWX5 399 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 OR2C3Q8N628 320 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 OR4A16Q8NH70 328 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 ZFAND1Q8TCF1 268 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 DYNLRB2Q8TF09 96 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 SCARB1Q8WTV0 552 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 ZNF414Q96IQ9 312 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 TMEM56Q96MV1 263 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 SOSTQ9BQB4 213 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 NXF2Q9GZY0 626 aaKnown RBP10.87□□□□□ -0.67
HMGN3-201ENST00000275036 MLXQ9UH92 298 aa10.87□□□□□ -0.67
HMGN3-201ENST00000275036 A0A0B4J293 547 aa10.86□□□□□ -0.67
HMGN3-201ENST00000275036 A0A0G2JRQ6 117 aa10.86□□□□□ -0.67
HMGN3-201ENST00000275036 CTSDP07339 412 aaPredicted RBP10.86□□□□□ -0.67
HMGN3-201ENST00000275036 CD7P09564 240 aa10.86□□□□□ -0.67
HMGN3-201ENST00000275036 TNFSF8P32971 234 aa10.86□□□□□ -0.67
HMGN3-201ENST00000275036 HSPE1P61604 102 aaKnown RBP10.86□□□□□ -0.67
HMGN3-201ENST00000275036 SPINK9Q5DT21 86 aa10.86□□□□□ -0.67
HMGN3-201ENST00000275036 PLET1Q6UQ28 207 aa10.86□□□□□ -0.67
HMGN3-201ENST00000275036 GTSCR1Q86UQ5 136 aa10.86□□□□□ -0.67
HMGN3-201ENST00000275036 OR1P1Q8NH06 330 aa10.86□□□□□ -0.67
HMGN3-201ENST00000275036 WDR89Q96FK6 387 aaPredicted RBP10.86□□□□□ -0.67
HMGN3-201ENST00000275036 RTBDNQ9BSG5 229 aaPredicted RBP10.86□□□□□ -0.67
HMGN3-201ENST00000275036 CHRDL1Q9BU40 450 aa10.86□□□□□ -0.67
HMGN3-201ENST00000275036 ZNF436Q9C0F3 470 aaPredicted RBP10.86□□□□□ -0.67
HMGN3-201ENST00000275036 TECRQ9NZ01 308 aaKnown RBP10.86□□□□□ -0.67
HMGN3-201ENST00000275036 COPZ2Q9P299 210 aa10.86□□□□□ -0.67
HMGN3-201ENST00000275036 CYB5BO43169 146 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 GSTZ1O43708 216 aaPredicted RBP10.85□□□□□ -0.67
HMGN3-201ENST00000275036 NOL3O60936 208 aaKnown RBP10.85□□□□□ -0.67
HMGN3-201ENST00000275036 AKAIN1P0CW23 69 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 UCP1P25874 307 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 ADMP35318 185 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 CD81P60033 236 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 MEF2DQ14814 521 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 TMEM61Q8N0U2 210 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 CCDC71LQ8N9Z2 235 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 UXS1Q8NBZ7 420 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 MCFD2Q8NI22 146 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 WFDC10AQ9H1F0 79 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 C5orf66Q9H5L9 145 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 PLEKHA3Q9HB20 300 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 C21orf62Q9NYP8 219 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 RABL2AQ9UBK7 228 aaPredicted RBP10.85□□□□□ -0.67
HMGN3-201ENST00000275036 RABL2BQ9UNT1 228 aa10.85□□□□□ -0.67
HMGN3-201ENST00000275036 ANKRD20A5PA0PJZ0 165 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 DISC1C4P0D8 188 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 I3L2K1 104 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 ST8SIA3O43173 380 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 OR5AC1P0C628 307 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 C8orf88P0DMB2 117 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 AKR1C2P52895 323 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 GUCA2BQ16661 112 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 HAGHQ16775 308 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 TRIM16LQ309B1 348 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 BTNL8Q6UX41 500 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 ZNF114Q8NC26 417 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 OR51S1Q8NGJ8 323 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 LHFPL5Q8TAF8 219 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 MUC7Q8TAX7 377 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 TMEM190Q8WZ59 177 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 BSCL2Q96G97 398 aaPredicted RBP10.84□□□□□ -0.67
HMGN3-201ENST00000275036 NEURL2Q9BR09 285 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 ZMAT4Q9H898 229 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 GPR132Q9UNW8 380 aa10.84□□□□□ -0.67
HMGN3-201ENST00000275036 C3orf84H3BNL1 204 aa10.83□□□□□ -0.68
HMGN3-201ENST00000275036 IGHV3-48P01763 117 aa10.83□□□□□ -0.68
HMGN3-201ENST00000275036 SURF2Q15527 256 aaPredicted RBP10.83□□□□□ -0.68
HMGN3-201ENST00000275036 ZNF57Q68EA5 555 aaPredicted RBP10.83□□□□□ -0.68
HMGN3-201ENST00000275036 LINC00322Q6ZN03 302 aaPredicted RBP10.83□□□□□ -0.68
HMGN3-201ENST00000275036 Q6ZRM9 215 aa10.83□□□□□ -0.68
HMGN3-201ENST00000275036 UBAC2Q8NBM4 344 aa10.83□□□□□ -0.68
HMGN3-201ENST00000275036 OR1L6Q8NGR2 347 aa10.83□□□□□ -0.68
HMGN3-201ENST00000275036 GLYATL2Q8WU03 294 aa10.83□□□□□ -0.68
HMGN3-201ENST00000275036 MISP3Q96FF7 219 aa10.83□□□□□ -0.68
HMGN3-201ENST00000275036 ATP6V0BQ99437 205 aa10.83□□□□□ -0.68
HMGN3-201ENST00000275036 TMEM222Q9H0R3 208 aa10.83□□□□□ -0.68
HMGN3-201ENST00000275036 RBM38Q9H0Z9 239 aaKnown RBP10.83□□□□□ -0.68
HMGN3-201ENST00000275036 EDA2RQ9HAV5 297 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms