RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 FAM216BQ8N7L0 139 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 DYSFO75923 2080 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 GGTLC3B5MD39 225 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 E7EUB6 86 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 OR7C2O60412 319 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 CD99P14209 185 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 REG1BP48304 166 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 KRTDAPP60985 99 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 FAM19A2Q8N3H0 131 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 TMEM178AQ8NBL3 297 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 RIF1Q5UIP0 2472 aaKnown RBP13.53□□□□□ -0.24
ZNF541-201ENST00000263351 J3QW42 95 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 ATOH7Q8N100 152 aa13.53□□□□□ -0.24
ZNF541-201ENST00000263351 TNFSF13O75888 250 aa13.52□□□□□ -0.24
ZNF541-201ENST00000263351 MGST1P10620 155 aaKnown RBP13.52□□□□□ -0.24
ZNF541-201ENST00000263351 PMCHP20382 165 aa13.52□□□□□ -0.24
ZNF541-201ENST00000263351 OR10J1P30954 320 aa13.52□□□□□ -0.24
ZNF541-201ENST00000263351 SEM1Q6ZVN7 128 aa13.52□□□□□ -0.24
ZNF541-201ENST00000263351 CCL13Q99616 98 aa13.52□□□□□ -0.24
ZNF541-201ENST00000263351 SAMD10Q9BYL1 202 aa13.52□□□□□ -0.24
ZNF541-201ENST00000263351 DKK4Q9UBT3 224 aa13.52□□□□□ -0.24
ZNF541-201ENST00000263351 JPT1Q9UK76 154 aa13.52□□□□□ -0.24
ZNF541-201ENST00000263351 NPSP0C0P6 89 aa13.52□□□□□ -0.25
ZNF541-201ENST00000263351 RAB4AP20338 218 aa13.52□□□□□ -0.25
ZNF541-201ENST00000263351 SUMO1P63165 101 aaKnown RBP13.52□□□□□ -0.25
ZNF541-201ENST00000263351 PRB3Q04118 309 aaPredicted RBP13.52□□□□□ -0.25
ZNF541-201ENST00000263351 MAJINQ3KP22 176 aa13.52□□□□□ -0.25
ZNF541-201ENST00000263351 AARDQ4LEZ3 155 aa13.52□□□□□ -0.25
ZNF541-201ENST00000263351 NABP2Q9BQ15 211 aa13.52□□□□□ -0.25
ZNF541-201ENST00000263351 M0R143 59 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 PLAUP00749 431 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 STARD4Q96DR4 205 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 TP73-AS1Q9UF72 201 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 NAT8BQ9UHF3 227 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 OR51B2Q9Y5P1 312 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 TRAV34A0A0B4J273 112 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 MGST3O14880 152 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 RHOBP62745 196 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 PRR20EP86478 221 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 PRR20CP86479 221 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 PRR20DP86480 221 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 PRR20BP86481 221 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 PRR20AP86496 221 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 C10orf55Q5SWW7 151 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 OR2T6Q8NHC8 308 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 SERTAD4Q9NUC0 356 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 ZNF318Q5VUA4 2279 aa13.51□□□□□ -0.25
ZNF541-201ENST00000263351 MRPS11P82912 194 aaKnown RBP13.5□□□□□ -0.25
ZNF541-201ENST00000263351 DIAPH2-AS1Q14236 149 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 RUSC1-AS1Q66K80 236 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 C19orf35Q6ZS72 473 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 ZNF71Q9NQZ8 489 aaPredicted RBP13.5□□□□□ -0.25
ZNF541-201ENST00000263351 OTOGLQ3ZCN5 2332 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 MPDU1O75352 247 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 SP9P0CG40 484 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 PYYP10082 97 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 GNG4P50150 75 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 TMPRSS3P57727 454 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 HSPE1P61604 102 aaKnown RBP13.5□□□□□ -0.25
ZNF541-201ENST00000263351 RPEL1Q2QD12 228 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 Q6ZVH6 145 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 OR4S2Q8NH73 311 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 IER2Q9BTL4 223 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 WNT10AQ9GZT5 417 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 TMEM14BQ9NUH8 114 aa13.5□□□□□ -0.25
ZNF541-201ENST00000263351 HELTA6NFD8 242 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 IGLV1-44P01699 117 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 APELAP0DMC3 54 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 SELENOTP62341 195 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 TCTEX1D1Q8N7M0 179 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 J3QR06 171 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 F2RL2O00254 374 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 CD24P25063 80 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 DLX1P56177 255 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 Q8N976 141 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 OR5AU1Q8NGC0 362 aa13.49□□□□□ -0.25
ZNF541-201ENST00000263351 TBL2Q9Y4P3 447 aaKnown RBP13.49□□□□□ -0.25
ZNF541-201ENST00000263351 ZNF891A8MT65 544 aaPredicted RBP13.48□□□□□ -0.25
ZNF541-201ENST00000263351 IGLV2-8P01709 118 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 TPPP2P59282 170 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 RPP30P78346 268 aaKnown RBP13.48□□□□□ -0.25
ZNF541-201ENST00000263351 BHLHA15Q7RTS1 189 aaPredicted RBP13.48□□□□□ -0.25
ZNF541-201ENST00000263351 DEFB123Q8N688 67 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 ACACAQ13085 2346 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 TMEM265A0A087WTH1 108 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 A0A1W2PN81 502 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 CGB3P0DN86 165 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 CGB7P0DN87 165 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 SRIP30626 198 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 TMEM249Q2WGJ8 235 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 MBNL2Q5VZF2 373 aaKnown RBP13.48□□□□□ -0.25
ZNF541-201ENST00000263351 OR52E5Q8NH55 327 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 ENY2Q9NPA8 101 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 SLC45A2Q9UMX9 530 aa13.48□□□□□ -0.25
ZNF541-201ENST00000263351 CT45A6P0DMU7 189 aa13.47□□□□□ -0.25
ZNF541-201ENST00000263351 CT45A5P0DMU8 189 aa13.47□□□□□ -0.25
ZNF541-201ENST00000263351 CT45A7P0DMV0 189 aa13.47□□□□□ -0.25
ZNF541-201ENST00000263351 LCN12Q6JVE5 192 aa13.47□□□□□ -0.25
ZNF541-201ENST00000263351 NEUROG1Q92886 237 aa13.47□□□□□ -0.25
ZNF541-201ENST00000263351 BTF3L4Q96K17 158 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms