RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 HINT1P49773 126 aaPredicted RBP6.87□□□□□ -1.31
PTPN3-201ENST00000262539 TOMM20LQ6UXN7 152 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 OR4C5Q8NGB2 326 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 DUX3Q96PT4 197 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 IGHV3-66A0A0C4DH42 116 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 FAM209BQ5JX69 171 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 CLEC9AQ6UXN8 241 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 C11orf44Q8N8P7 122 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 PAXXQ9BUH6 204 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 MANBALQ9NQG1 85 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 RALYQ9UKM9 306 aaKnown RBP6.87□□□□□ -1.31
PTPN3-201ENST00000262539 SCN2AQ99250 2005 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 FAM157CP0CG43 387 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 RCC1P18754 421 aaPredicted RBP6.87□□□□□ -1.31
PTPN3-201ENST00000262539 MFAP4P55083 255 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 RANP62826 216 aaKnown RBP6.87□□□□□ -1.31
PTPN3-201ENST00000262539 OR4A47Q6IF82 309 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 ZNF818PQ6ZRF7 136 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 PLPPR1Q8TBJ4 325 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 SRSF8Q9BRL6 282 aaKnown RBP6.87□□□□□ -1.31
PTPN3-201ENST00000262539 BET1LQ9NYM9 111 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 A8MXK9 166 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 MLNRO43193 412 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 S1PR2O95136 353 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 RPLP1P05386 114 aaKnown RBP6.86□□□□□ -1.31
PTPN3-201ENST00000262539 DANCRP0C864 163 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 HKR1P10072 659 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 CX3CL1P78423 397 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 CR1LQ2VPA4 569 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 SLC35B3Q9H1N7 401 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 DNAJC13O75165 2243 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 SFTA3P0C7M3 94 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 CD81P60033 236 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 ERVS71-1P61550 626 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 ZNF343Q6P1L6 599 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 WDR73Q6P4I2 378 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 ABHD12Q8N2K0 398 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 TMEM37Q8WXS4 190 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 TRAV34A0A0B4J273 112 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 HSPB1P04792 205 aaKnown RBP6.86□□□□□ -1.31
PTPN3-201ENST00000262539 REG1AP05451 166 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 DLX6P56179 175 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 POLR2GP62487 172 aaKnown RBP eCLIP6.86□□□□□ -1.31
PTPN3-201ENST00000262539 TNFRSF9Q07011 255 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 C1orf122Q6ZSJ8 110 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 OR2D3Q8NGH3 330 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 GPR146Q96CH1 333 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 LINC00574Q9H8X3 128 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 PEMTQ9UBM1 199 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 TRAV14DV4A0A0A6YYC5 116 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 IGHV1-46P01743 117 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 PQLC2Q6ZP29 291 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 BIVMQ86UB2 503 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 MARCH11A6NNE9 402 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 CD33P20138 364 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 FAM27E3Q08E93 113 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 MRGPRFQ96AM1 343 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 PRR13Q9NZ81 148 aa6.86□□□□□ -1.31
PTPN3-201ENST00000262539 HIST1H1BP16401 226 aaKnown RBP6.85□□□□□ -1.31
PTPN3-201ENST00000262539 MALP21145 153 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 GCSAMLQ5JQS6 135 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 STHQ8IWL8 128 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 JKAMPQ9P055 326 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 CARHSP1Q9Y2V2 147 aaKnown RBP6.85□□□□□ -1.31
PTPN3-201ENST00000262539 NBASA2RRP1 2371 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 PSCAO43653 123 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 NUDT3O95989 172 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 RD3LP0DJH9 198 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 CDKN1AP38936 164 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 CD69Q07108 199 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 SLC16A13Q7RTY0 426 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 C3orf56Q8N813 242 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 DMRTA2Q96SC8 542 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 LINC01587Q99440 93 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 NPVFQ9HCQ7 196 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 CBLN4Q9NTU7 201 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 ISLRO14498 428 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 TDGF1P3P51864 188 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 HIST1H1AQ02539 215 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-201ENST00000262539 FOXF2Q12947 444 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 GUK1Q16774 197 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 TEPPQ6URK8 271 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 C12orf54Q6X4T0 127 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 GATAD1Q8WUU5 269 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 SLC25A33Q9BSK2 321 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 PGPEP1Q9NXJ5 209 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-201ENST00000262539 WIPF3A6NGB9 483 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 DSCR9P59020 149 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 TBX15Q96SF7 602 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 LOC102724200A0A096LPH7 203 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-201ENST00000262539 C9JCJ5 164 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 C11orf94C9JXX5 98 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 HLA-DRB5Q30154 266 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 MRPL54Q6P161 138 aaKnown RBP6.85□□□□□ -1.31
PTPN3-201ENST00000262539 ARID1AO14497 2285 aa6.85□□□□□ -1.31
PTPN3-201ENST00000262539 TRGV2A0A075B6R0 118 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 CXorf65A6NEN9 183 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 GPR82Q96P67 336 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 CLEC7AQ9BXN2 247 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms