RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SSX8Q7RTT4 187 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 HOGA1Q86XE5 327 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 ABHD12Q8N2K0 398 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 OR10A2Q9H208 303 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 KLF12Q9Y4X4 402 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 E9PLD3 99 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 C11orf98E9PRG8 122 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 OXTP01178 125 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 PCBP3P57721 371 aaKnown RBP6.39□□□□□ -1.39
GPNMB-201ENST00000258733 TAS2R45P59539 299 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 FAM53BQ14153 422 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 ZNF672Q499Z4 452 aaPredicted RBP6.39□□□□□ -1.39
GPNMB-201ENST00000258733 SPRNQ5BIV9 151 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 TEPPQ6URK8 271 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 ZNF627Q7L945 461 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 FBXL14Q8N1E6 418 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 FBXL15Q9H469 300 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 NCOA6Q14686 2063 aaPredicted RBP6.38□□□□□ -1.39
GPNMB-201ENST00000258733 NAPSAO96009 420 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 IGHMP01871 453 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 COX7A2P14406 83 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 GCSHP23434 173 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 SSR4P51571 173 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 OR2A1Q8NGT9 310 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 FGF13Q92913 245 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 COL4A4P53420 1690 aaPredicted RBP6.38□□□□□ -1.39
GPNMB-201ENST00000258733 ANAPC1Q9H1A4 1944 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 A0A0A6YYD5 115 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 RIIAD1A6NNX1 92 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 SLC17A2O00624 439 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 SLURP2P0DP57 97 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 FBXW4P57775 412 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 ZC2HC1BQ5TFG8 222 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 Q6ZQT7 251 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 MEX3DQ86XN8 651 aaKnown RBP6.38□□□□□ -1.39
GPNMB-201ENST00000258733 C2orf48Q96LS8 159 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 Q96MF0 132 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 METRNQ9UJH8 293 aa6.38□□□□□ -1.39
GPNMB-201ENST00000258733 MYO9BQ13459 2157 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 PRKNO60260 465 aaPredicted RBP6.37□□□□□ -1.39
GPNMB-201ENST00000258733 MPDU1O75352 247 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 ZNF90Q03938 601 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 DPTQ07507 201 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 SLC25A47Q6Q0C1 308 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 C3orf22Q8N5N4 141 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 UBE2E3Q969T4 207 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 CHCHD5Q9BSY4 110 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 MLST8Q9BVC4 326 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 GNB1LQ9BYB4 327 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 K7ENP7 123 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 TAL1P17542 331 aaPredicted RBP6.37□□□□□ -1.39
GPNMB-201ENST00000258733 HOXD9P28356 352 aaPredicted RBP6.37□□□□□ -1.39
GPNMB-201ENST00000258733 OPRK1P41145 380 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 GUSBP1Q15486 140 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 DMRTC1Q5HYR2 192 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 PEAR1Q5VY43 1037 aaPredicted RBP6.37□□□□□ -1.39
GPNMB-201ENST00000258733 AMTNQ6UX39 209 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 FAM231DQ6ZW35 169 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 CRIPAKQ8N1N5 446 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 MORN4Q8NDC4 146 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 OR51H1Q8NH63 302 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 OR2T6Q8NHC8 308 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 MBD3L2Q8NHZ7 208 aaPredicted RBP6.37□□□□□ -1.39
GPNMB-201ENST00000258733 C9orf85Q96MD7 179 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 GLIPR2Q9H4G4 154 aa6.37□□□□□ -1.39
GPNMB-201ENST00000258733 ZIC3O60481 467 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 SFTPDP35247 375 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 ASIPP42127 132 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 EEF1DP3Q658K8 133 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 SCN3AQ9NY46 2000 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 OBSL1O75147 1896 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 IGKV6D-21A0A0A0MT36 114 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 NPIPB6E9PJ23 425 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 NXPH3O95157 252 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 TNFRSF4P43489 277 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 NXPH1P58417 271 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 OR1C1Q15619 314 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 LYRM7Q5U5X0 104 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 ZNF740Q8NDX6 193 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 DPH3Q96FX2 82 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 TTTY10Q9BZA0 68 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 PYGO1Q9Y3Y4 419 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 CHCHD2Q9Y6H1 151 aaPredicted RBP6.36□□□□□ -1.39
GPNMB-201ENST00000258733 TDRD6O60522 2096 aaKnown RBP6.36□□□□□ -1.39
GPNMB-201ENST00000258733 MYO7AQ13402 2215 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 A1L4Q6 167 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 TMEM178BH3BS89 294 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 J3QQQ9 107 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 UQCRQO14949 82 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 SSR2P43308 183 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 DGAT2L7PQ6IED9 249 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 LINC00479Q96M42 142 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 SCGB3A2Q96PL1 93 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 PRO3102Q9H379 93 aa6.36□□□□□ -1.39
GPNMB-201ENST00000258733 PCDH15Q96QU1 1955 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 NUP210Q8TEM1 1887 aaPredicted RBP6.35□□□□□ -1.39
GPNMB-201ENST00000258733 TMED7-TICAM2A0A0A6YYA0 188 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 CEACAM18A8MTB9 384 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 M0R2P5 195 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 FGF6P10767 208 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms