RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 FAM90A2PQ658T7 463 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 MKXQ8IYA7 352 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 GJC3Q8NFK1 279 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 SIT1Q9Y3P8 196 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 IGHV4-39P01824 125 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 PYYP10082 97 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 SUB1P53999 127 aaKnown RBP eCLIP5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 FOXI2Q6ZQN5 318 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 OCIAD1Q9NX40 245 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 CELA2BP08218 269 aaPredicted RBP5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 FOXC1Q12948 553 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 WDR38Q5JTN6 314 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 TMEM170BQ5T4T1 132 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 NEGR1Q7Z3B1 354 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 TEN1Q86WV5 123 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 AMMECR1Q9Y4X0 333 aaPredicted RBP5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 FAM236AA0A1B0GUQ0 79 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 FAM236BA0A1B0GV22 79 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 H3BML4 177 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 TMEM50BP56557 158 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 STPG3Q8N7X2 389 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 GATD1Q8NB37 220 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 DDIT4LQ96D03 193 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 DNAL4O96015 105 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 MALP21145 153 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 C3orf22Q8N5N4 141 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 NUP35Q8NFH5 326 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 OR4F17Q8NGA8 305 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 C20orf78Q9BR46 151 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 C2CD4DB7Z1M9 353 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 K7ESF4 209 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 CD55P08174 381 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 SP9P0CG40 484 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 FCGR2BP31994 310 aaPredicted RBP5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 PLGLB1Q02325 96 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 SLC25A53Q5H9E4 307 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 CIARTQ8N365 385 aaPredicted RBP5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 VOPP1Q96AW1 172 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 PEMTQ9UBM1 199 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 K7ESM1 405 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 IGHG4P01861 327 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 DEFB110Q30KQ9 67 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 KLF17Q5JT82 389 aaPredicted RBP5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 FGF14Q92915 247 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 IGHV1-24A0A0C4DH33 117 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 C17orf51A8MQB3 221 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 COX7A2P2O60397 106 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 CACNG7P62955 275 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 C20orf141Q9NUB4 165 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 RFNGQ9Y644 331 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 CITO14578 2027 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 PYGO2Q9BRQ0 406 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 TMEM243Q9BU79 118 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 DEFB126Q9BYW3 111 aa5.69□□□□□ -1.5
PDGFRA-201ENST00000257290 TMEM202A6NGA9 273 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 TMEM187Q14656 261 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 PRSS53Q2L4Q9 553 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 MS4A18Q3C1V0 323 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 OSTCQ9NRP0 149 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 CHD3Q12873 2000 aaKnown RBP5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 A0A1W2PPC4 97 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 NPIPB11E5RHQ5 1161 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 RPL35AP18077 110 aaKnown RBP5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 UNC119Q13432 240 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 PDCD1Q15116 288 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 GCSAMQ8N6F7 178 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 BAALCQ8WXS3 180 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 POLR2AP24928 1970 aaKnown RBP5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 LRRC37A2A6NM11 1700 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 IGLV3-16A0A075B6K0 115 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 H0YGG7 62 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 PDCD6O75340 191 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 ACP1P24666 158 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 AMTNQ6UX39 209 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 MARCH3Q86UD3 253 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 C8orf31Q8N9H6 132 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 SLC37A2Q8TED4 501 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 FAM240AA0A1B0GVK7 77 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 EGR1P18146 543 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 GCHFRP30047 84 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 LINC01559Q495D7 138 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 CENPWQ5EE01 88 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 C1QTNF5Q9BXJ0 243 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 C6orf106Q9H6K1 298 aaPredicted RBP5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 SIGLEC9Q9Y336 463 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 PLXNA1Q9UIW2 1896 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 FFAR1O14842 300 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 TMEM196Q5HYL7 178 aa5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 LILRA3Q8N6C8 439 aaPredicted RBP5.68□□□□□ -1.5
PDGFRA-201ENST00000257290 THBDP07204 575 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 PLA2G2FQ9BZM2 168 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 SAA2-SAA4A0A096LPE2 208 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 NMSQ5H8A3 153 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 PDPNQ86YL7 162 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 OR52N5Q8NH56 324 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 FGF22Q9HCT0 170 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 STARD5Q9NSY2 213 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 WDR81Q562E7 1941 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 SCTP09683 121 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms