RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TRAV8-1A0A0A6YYK1 113 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 TGFAP01135 160 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 LYZP61626 148 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 TRIP12Q14669 1992 aaPredicted RBP10.81□□□□□ -0.68
VAMP4-201ENST00000236192 ORMDL3Q8N138 153 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 FMC1Q96HJ9 113 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 EFNB3Q15768 340 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 SRSF7Q16629 238 aaKnown RBP eCLIP10.8□□□□□ -0.68
VAMP4-201ENST00000236192 NFAM1Q8NET5 270 aaPredicted RBP10.8□□□□□ -0.68
VAMP4-201ENST00000236192 DLL3Q9NYJ7 618 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 ACP1P24666 158 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 RPRMLQ8N4K4 120 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 ZNF488Q96MN9 340 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 MCRIP2Q9BUT9 160 aaKnown RBP10.8□□□□□ -0.68
VAMP4-201ENST00000236192 C1QTNF5Q9BXJ0 243 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 SMPXQ9UHP9 88 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 RNF115Q9Y4L5 304 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 BTAF1O14981 1849 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 Q6AWC8 147 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 YRDCQ86U90 279 aaKnown RBP10.8□□□□□ -0.68
VAMP4-201ENST00000236192 TUSC5Q8IXB3 177 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 OR13H1Q8NG92 308 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 EPDR1Q9UM22 224 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 SPAG17Q6Q759 2223 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 PF4V1P10720 104 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.8□□□□□ -0.68
VAMP4-201ENST00000236192 DEFB118Q96PH6 123 aa10.8□□□□□ -0.68
VAMP4-201ENST00000236192 GATA2P23769 480 aaPredicted RBP10.79□□□□□ -0.68
VAMP4-201ENST00000236192 V9GYV3 84 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 IGHV3-7P01780 117 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 TNFRSF4P43489 277 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 ARG2P78540 354 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 HOXA4Q00056 320 aaPredicted RBP10.79□□□□□ -0.68
VAMP4-201ENST00000236192 MEIG1Q5JSS6 88 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 C8orf86Q6ZUL3 223 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 CT55Q8WUE5 264 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 GPR82Q96P67 336 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 FAM60AQ9NP50 221 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 TCF19Q9Y242 345 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 H0YJW9 148 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 RBP4P02753 201 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 ORM1P02763 201 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 KLRB1Q12918 225 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 SFTA2Q6UW10 78 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 SCRG1O75711 98 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 AREGP15514 252 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 HSPE1P61604 102 aaKnown RBP10.79□□□□□ -0.68
VAMP4-201ENST00000236192 VMA21Q3ZAQ7 101 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 KLF17Q5JT82 389 aaPredicted RBP10.79□□□□□ -0.68
VAMP4-201ENST00000236192 SPATA46Q5T0L3 261 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 C9orf153Q5TBE3 101 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 PCSK4Q6UW60 755 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 OBP2AQ9NY56 170 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 INSIG2Q9Y5U4 225 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 ANK1P16157 1881 aa10.79□□□□□ -0.68
VAMP4-201ENST00000236192 CISD3P0C7P0 127 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 CITED2Q99967 270 aaPredicted RBP10.78□□□□□ -0.68
VAMP4-201ENST00000236192 CYB561P49447 251 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 PAX9P55771 341 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 OR1L1Q8NH94 360 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 H1FXQ92522 213 aaKnown RBP10.78□□□□□ -0.68
VAMP4-201ENST00000236192 SCRT2Q9NQ03 307 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 LINC01559Q495D7 138 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 SPANXCQ9NY87 97 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 ONECUT1Q9UBC0 465 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 COLQQ9Y215 455 aaPredicted RBP10.78□□□□□ -0.68
VAMP4-201ENST00000236192 IGHV1-24A0A0C4DH33 117 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 A0A1W2PRD5 423 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 A0A1W2PRF3 423 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 A0A1W2PRM7 423 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 ZFP36L1Q07352 338 aaKnown RBP10.78□□□□□ -0.68
VAMP4-201ENST00000236192 WFDC3Q8IUB2 231 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 ZNF114Q8NC26 417 aa10.78□□□□□ -0.68
VAMP4-201ENST00000236192 A0A1W2PQF6 199 aa10.77□□□□□ -0.68
VAMP4-201ENST00000236192 SH2D7A6NKC9 451 aaPredicted RBP10.77□□□□□ -0.68
VAMP4-201ENST00000236192 PTGDSP41222 190 aa10.77□□□□□ -0.68
VAMP4-201ENST00000236192 LGALS7P47929 136 aa10.77□□□□□ -0.68
VAMP4-201ENST00000236192 PLAURQ03405 335 aa10.77□□□□□ -0.68
VAMP4-201ENST00000236192 POU2AF1Q16633 256 aa10.77□□□□□ -0.68
VAMP4-201ENST00000236192 SCN3AQ9NY46 2000 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 WIPF3A6NGB9 483 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 H3BMG7 143 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 CCL2P13500 99 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 ASCL4Q6XD76 172 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 KIR3DL3Q8N743 410 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 OR10X1Q8NGY0 326 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 ZNF688P0C7X2 276 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 EBLN2Q6P2I7 272 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 SRSF8Q9BRL6 282 aaKnown RBP10.77□□□□□ -0.69
VAMP4-201ENST00000236192 HIGD1AQ9Y241 93 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 TSC2P49815 1807 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 TRBV7-9A0A0J9YWB2 115 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 DLL1O00548 723 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 OR2H2O95918 312 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 CTSBP07858 339 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 CTRLP40313 264 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 FOLR3P41439 243 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 TMEM155Q4W5P6 130 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 LIME1Q9H400 295 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 MMP17Q9ULZ9 603 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms