RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 NSUN5P1Q3KNT7 163 aa15.87■□□□□ 0.13
SMPD3-201ENST00000219334 MARVELD3Q96A59 401 aa15.87■□□□□ 0.13
SMPD3-201ENST00000219334 SDF2L1Q9HCN8 221 aa15.87■□□□□ 0.13
SMPD3-201ENST00000219334 TMEM167AQ8TBQ9 72 aa15.87■□□□□ 0.13
SMPD3-201ENST00000219334 HBBP68871 147 aa15.87■□□□□ 0.13
SMPD3-201ENST00000219334 C11orf44Q8N8P7 122 aa15.87■□□□□ 0.13
SMPD3-201ENST00000219334 RNASE4P34096 147 aaKnown RBP15.87■□□□□ 0.13
SMPD3-201ENST00000219334 FOXF2Q12947 444 aa15.87■□□□□ 0.13
SMPD3-201ENST00000219334 ZNF672Q499Z4 452 aaPredicted RBP15.87■□□□□ 0.13
SMPD3-201ENST00000219334 SDK2Q58EX2 2172 aa15.86■□□□□ 0.13
SMPD3-201ENST00000219334 C7orf71A4D174 169 aa15.86■□□□□ 0.13
SMPD3-201ENST00000219334 CD24P25063 80 aa15.86■□□□□ 0.13
SMPD3-201ENST00000219334 SFRP2Q96HF1 295 aa15.86■□□□□ 0.13
SMPD3-201ENST00000219334 UPK2O00526 184 aa15.86■□□□□ 0.13
SMPD3-201ENST00000219334 REC114Q7Z4M0 266 aa15.86■□□□□ 0.13
SMPD3-201ENST00000219334 GTSCR1Q86UQ5 136 aa15.86■□□□□ 0.13
SMPD3-201ENST00000219334 IGHV1-46P01743 117 aa15.86■□□□□ 0.13
SMPD3-201ENST00000219334 DNLZQ5SXM8 178 aa15.86■□□□□ 0.13
SMPD3-201ENST00000219334 SCN2AQ99250 2005 aa15.86■□□□□ 0.13
SMPD3-201ENST00000219334 FOLR2P14207 255 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 RHOGP84095 191 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 ALPK2Q86TB3 2170 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 TRBV9A0A0B4J1U6 114 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 KIAA1644Q3SXP7 199 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 TMEM250H0YL14 139 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 CGAP01215 116 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 SLC25A28Q96A46 364 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 PLSCR4Q9NRQ2 329 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 DUSP14O95147 198 aaKnown RBP15.85■□□□□ 0.13
SMPD3-201ENST00000219334 SCGB1A1P11684 91 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 WFIKKN1Q96NZ8 548 aa15.85■□□□□ 0.13
SMPD3-201ENST00000219334 LEMD1Q68G75 181 aa15.84■□□□□ 0.13
SMPD3-201ENST00000219334 C2orf88Q9BSF0 95 aa15.84■□□□□ 0.13
SMPD3-201ENST00000219334 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
SMPD3-201ENST00000219334 PEX7O00628 323 aa15.84■□□□□ 0.13
SMPD3-201ENST00000219334 FAM166AQ6J272 317 aa15.84■□□□□ 0.13
SMPD3-201ENST00000219334 NCOR1O75376 2440 aa15.84■□□□□ 0.13
SMPD3-201ENST00000219334 TRBV6-7A0A0A0MS04 114 aa15.84■□□□□ 0.13
SMPD3-201ENST00000219334 TRAV14DV4A0A0A6YYC5 116 aa15.84■□□□□ 0.13
SMPD3-201ENST00000219334 PKIAP61925 76 aa15.84■□□□□ 0.13
SMPD3-201ENST00000219334 JOSD1Q15040 202 aaPredicted RBP15.84■□□□□ 0.13
SMPD3-201ENST00000219334 MORN2Q502X0 79 aa15.84■□□□□ 0.13
SMPD3-201ENST00000219334 TIMM23O14925 209 aa15.83■□□□□ 0.13
SMPD3-201ENST00000219334 TMEM170BQ5T4T1 132 aa15.83■□□□□ 0.13
SMPD3-201ENST00000219334 ZNF600Q6ZNG1 722 aa15.83■□□□□ 0.13
SMPD3-201ENST00000219334 OR11H4Q8NGC9 324 aa15.83■□□□□ 0.13
SMPD3-201ENST00000219334 TNFRSF14Q92956 283 aa15.83■□□□□ 0.13
SMPD3-201ENST00000219334 RCC1LQ96I51 464 aaKnown RBP15.83■□□□□ 0.13
SMPD3-201ENST00000219334 SLC50A1Q9BRV3 221 aa15.83■□□□□ 0.13
SMPD3-201ENST00000219334 GPR61Q9BZJ8 451 aa15.83■□□□□ 0.13
SMPD3-201ENST00000219334 B4DSR2 109 aa15.83■□□□□ 0.12
SMPD3-201ENST00000219334 EGR1P18146 543 aa15.83■□□□□ 0.12
SMPD3-201ENST00000219334 PVRIGQ6DKI7 326 aa15.83■□□□□ 0.12
SMPD3-201ENST00000219334 CACNA1BQ00975 2339 aa15.83■□□□□ 0.12
SMPD3-201ENST00000219334 PLXNA1Q9UIW2 1896 aa15.83■□□□□ 0.12
SMPD3-201ENST00000219334 TBX6O95947 436 aaPredicted RBP15.83■□□□□ 0.12
SMPD3-201ENST00000219334 KCNS1Q96KK3 526 aa15.83■□□□□ 0.12
SMPD3-201ENST00000219334 FBLL1A6NHQ2 334 aaKnown RBP15.82■□□□□ 0.12
SMPD3-201ENST00000219334 SIGLEC5O15389 551 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 LINC00271P0C7V0 271 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 CIARTQ8N365 385 aaPredicted RBP15.82■□□□□ 0.12
SMPD3-201ENST00000219334 OR10S1Q8NGN2 331 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 SPTBN1Q01082 2364 aaKnown RBP15.82■□□□□ 0.12
SMPD3-201ENST00000219334 CXorf65A6NEN9 183 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 OR9G9P0C7N8 305 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 TFF3Q07654 80 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 GCSAMLQ5JQS6 135 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 FMC1Q96HJ9 113 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 LEPP41159 167 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 OR1P1Q8NH06 330 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 FHITP49789 147 aa15.82■□□□□ 0.12
SMPD3-201ENST00000219334 RPLP1P05386 114 aaKnown RBP15.81■□□□□ 0.12
SMPD3-201ENST00000219334 SPATA45Q537H7 98 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 TMEM144Q7Z5S9 345 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 KIF13BQ9NQT8 1826 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 CYB5R2Q6BCY4 276 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 C12orf54Q6X4T0 127 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 PUSL1Q8N0Z8 303 aaKnown RBP15.81■□□□□ 0.12
SMPD3-201ENST00000219334 PRELID3AQ96N28 172 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 VENTXO95231 258 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 DNAL4O96015 105 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 MSRB2Q9Y3D2 182 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 TGIF2-C20orf24A0A0A6YYL0 155 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 OR11H12B2RN74 326 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 ZNF497Q6ZNH5 498 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 OR11H1Q8NG94 326 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 OR11H2Q8NH07 326 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 MESP1Q9BRJ9 268 aa15.81■□□□□ 0.12
SMPD3-201ENST00000219334 H3BRM9 83 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 OTX1P32242 354 aaPredicted RBP15.8■□□□□ 0.12
SMPD3-201ENST00000219334 Q9H3A6 140 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 RBBP6Q7Z6E9 1792 aaKnown RBP15.8■□□□□ 0.12
SMPD3-201ENST00000219334 CFAP161Q6P656 301 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 TMEM136Q6ZRR5 245 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 ST6GALNAC3Q8NDV1 305 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 RNF125Q96EQ8 232 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 HEATR5BQ9P2D3 2071 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 BRCA1P38398 1863 aaKnown RBP15.8■□□□□ 0.12
SMPD3-201ENST00000219334 FABP2P12104 132 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 TDGF1P13385 188 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms