RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 FAM214BQ7L5A3 538 aa8.98□□□□□ -0.97
SNIP1-204ENST00000638725 MOB3BQ86TA1 216 aa8.98□□□□□ -0.97
SNIP1-204ENST00000638725 ZNRF1Q8ND25 227 aa8.98□□□□□ -0.97
SNIP1-204ENST00000638725 FAM216AQ8WUB2 273 aa8.98□□□□□ -0.97
SNIP1-204ENST00000638725 DDB2Q92466 427 aa8.98□□□□□ -0.97
SNIP1-204ENST00000638725 RBM14Q96PK6 669 aaKnown RBP8.98□□□□□ -0.97
SNIP1-204ENST00000638725 CLCF1Q9UBD9 225 aa8.98□□□□□ -0.97
SNIP1-204ENST00000638725 NBEAQ8NFP9 2946 aa8.98□□□□□ -0.97
SNIP1-204ENST00000638725 TRIOBPQ9H2D6 2365 aa8.98□□□□□ -0.97
SNIP1-204ENST00000638725 COL6A3P12111 3177 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 LINC00869P0C866 280 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 GNG4P50150 75 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 TCL1AP56279 114 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 MRPL52Q86TS9 123 aaKnown RBP8.97□□□□□ -0.97
SNIP1-204ENST00000638725 SIGLECL1Q8N7X8 197 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 OR2Z1Q8NG97 314 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 OR4S2Q8NH73 311 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 SFXN3Q9BWM7 321 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 GNB1LQ9BYB4 327 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 LPAR2Q9HBW0 351 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 GOLT1BQ9Y3E0 138 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 HELTA6NFD8 242 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 GPX1P07203 203 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 AREGP15514 252 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 RAB31Q13636 194 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 OR4A47Q6IF82 309 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 Q8N976 141 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 RCHY1Q96PM5 261 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 TBL2Q9Y4P3 447 aaKnown RBP8.97□□□□□ -0.97
SNIP1-204ENST00000638725 KNTC1P50748 2209 aa8.97□□□□□ -0.97
SNIP1-204ENST00000638725 MGST3O14880 152 aa8.96□□□□□ -0.97
SNIP1-204ENST00000638725 GATA2P23769 480 aaPredicted RBP8.96□□□□□ -0.97
SNIP1-204ENST00000638725 HSPE1P61604 102 aaKnown RBP8.96□□□□□ -0.97
SNIP1-204ENST00000638725 FER1L6-AS2Q96M78 137 aa8.96□□□□□ -0.97
SNIP1-204ENST00000638725 NABP2Q9BQ15 211 aa8.96□□□□□ -0.97
SNIP1-204ENST00000638725 ENY2Q9NPA8 101 aa8.96□□□□□ -0.97
SNIP1-204ENST00000638725 TRBV9A0A0B4J1U6 114 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 SRRM5B3KS81 715 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 DIRC3C9JPN6 131 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 F2RL2O00254 374 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 PMCHP20382 165 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 AMTP48728 403 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 CX3CL1P78423 397 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 SPRNQ5BIV9 151 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 TMEM136Q6ZRR5 245 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 NEUROG1Q92886 237 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 ZNF503Q96F45 646 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 TMEM14BQ9NUH8 114 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 ZNF586Q9NXT0 402 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 CALYQ9NYX4 217 aa8.96□□□□□ -0.98
SNIP1-204ENST00000638725 SAA2-SAA4A0A096LPE2 208 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 IGHV2OR16-5A0A0B4J2B6 119 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 SAA2P0DJI9 122 aaPredicted RBP8.95□□□□□ -0.98
SNIP1-204ENST00000638725 KIR2DS2P43631 304 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 TFPI2P48307 235 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 MRPL54Q6P161 138 aaKnown RBP8.95□□□□□ -0.98
SNIP1-204ENST00000638725 C1orf210Q8IVY1 113 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 GCSAMQ8N6F7 178 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 NRN1Q9NPD7 142 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 IDI2-AS1Q9NZ38 188 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 IL19Q9UHD0 177 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 FOXA2Q9Y261 457 aaPredicted RBP8.95□□□□□ -0.98
SNIP1-204ENST00000638725 ZDBF2Q9HCK1 2354 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 IGKV1OR2-108A0A075B7D4 117 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 OR7C2O60412 319 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 OR10J4P0C629 311 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 KIR2DL2P43627 348 aaPredicted RBP8.95□□□□□ -0.98
SNIP1-204ENST00000638725 MSMPQ1L6U9 139 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 CT45A1Q5HYN5 189 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 CT45A3Q8NHU0 189 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 SLC25A10Q9UBX3 287 aaPredicted RBP8.95□□□□□ -0.98
SNIP1-204ENST00000638725 SLC45A2Q9UMX9 530 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 GGTLC3B5MD39 225 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 GUSBP1Q15486 140 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 CR1LQ2VPA4 569 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 TIGITQ495A1 244 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 FAM201AQ5SY85 155 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 ASPHD1Q5U4P2 390 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 TMEM178AQ8NBL3 297 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 OR4B1Q8NGF8 309 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 PPP1R35Q8TAP8 253 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 KCNS1Q96KK3 526 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 ARRDC1-AS1Q9H2J1 176 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 GCM1Q9NP62 436 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 TMEM167BQ9NRX6 74 aa8.95□□□□□ -0.98
SNIP1-204ENST00000638725 IGHV1-18A0A0C4DH31 117 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 A0A1W2PS18 150 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 ZNF253O75346 499 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 MT-ND6P03923 174 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 SRIP30626 198 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 ZNF83P51522 516 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 SUMO1P63165 101 aaKnown RBP8.94□□□□□ -0.98
SNIP1-204ENST00000638725 GAGE1Q13065 139 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 C17orf58Q2M2W7 97 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 SPATA45Q537H7 98 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 MBNL2Q5VZF2 373 aaKnown RBP8.94□□□□□ -0.98
SNIP1-204ENST00000638725 ALKBH2Q6NS38 261 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 C9orf106Q8NAJ2 232 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 RNF2Q99496 336 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 OSTCQ9NRP0 149 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms