RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 WT1-ASQ06250 92 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 ZNF343Q6P1L6 599 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 GDPD1Q8N9F7 314 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 LHFPL5Q8TAF8 219 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 QTRT1Q9BXR0 403 aaKnown RBP16.76■□□□□ 0.27
SCN1B-206ENST00000638536 NDUFA4L2Q9NRX3 87 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 SCP2D1Q9UJQ7 156 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 OR51B2Q9Y5P1 312 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 SORL1Q92673 2214 aa16.75■□□□□ 0.27
SCN1B-206ENST00000638536 A0A0G2JRQ6 117 aa16.75■□□□□ 0.27
SCN1B-206ENST00000638536 P0C879 139 aa16.75■□□□□ 0.27
SCN1B-206ENST00000638536 UCP1P25874 307 aa16.75■□□□□ 0.27
SCN1B-206ENST00000638536 H2BFWTQ7Z2G1 175 aa16.75■□□□□ 0.27
SCN1B-206ENST00000638536 SLC25A42Q86VD7 318 aa16.75■□□□□ 0.27
SCN1B-206ENST00000638536 GLYATL2Q8WU03 294 aa16.75■□□□□ 0.27
SCN1B-206ENST00000638536 NAA60Q9H7X0 242 aa16.75■□□□□ 0.27
SCN1B-206ENST00000638536 TMEM14BQ9NUH8 114 aa16.75■□□□□ 0.27
SCN1B-206ENST00000638536 CRYM-AS1A6NIL9 109 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 C15orf61A6NNL5 157 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 SNAPC5O75971 98 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 NDUFB8O95169 186 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 OR1L8Q8NGR8 309 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 USMG5Q96IX5 58 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 HINT2Q9BX68 163 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 PRR13Q9NZ81 148 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 S4R3C0 116 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 DUS4LO95620 317 aaKnown RBP16.74■□□□□ 0.27
SCN1B-206ENST00000638536 TRAPPC2P0DI81 140 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 TRAPPC2BP0DI82 140 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 TRIM16LQ309B1 348 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 TMEM222Q9H0R3 208 aa16.74■□□□□ 0.27
SCN1B-206ENST00000638536 A0A0B4J293 547 aa16.73■□□□□ 0.27
SCN1B-206ENST00000638536 TEX13DA0A0J9YY54 714 aaPredicted RBP16.73■□□□□ 0.27
SCN1B-206ENST00000638536 FAM223BA6NKX1 122 aa16.73■□□□□ 0.27
SCN1B-206ENST00000638536 OR13C7P0DN81 318 aa16.73■□□□□ 0.27
SCN1B-206ENST00000638536 C15orf32Q32M92 178 aa16.73■□□□□ 0.27
SCN1B-206ENST00000638536 FAM223AQ8IWN6 122 aa16.73■□□□□ 0.27
SCN1B-206ENST00000638536 NECAP1Q8NC96 275 aa16.73■□□□□ 0.27
SCN1B-206ENST00000638536 FBXL7Q9UJT9 491 aa16.73■□□□□ 0.27
SCN1B-206ENST00000638536 PRNDQ9UKY0 176 aa16.73■□□□□ 0.27
SCN1B-206ENST00000638536 IGLV11-55A0A075B6I3 123 aa16.72■□□□□ 0.27
SCN1B-206ENST00000638536 IGHV3-23P01764 117 aa16.72■□□□□ 0.27
SCN1B-206ENST00000638536 AP3S2P59780 193 aa16.72■□□□□ 0.27
SCN1B-206ENST00000638536 ATP5G2Q06055 141 aa16.72■□□□□ 0.27
SCN1B-206ENST00000638536 EXOSC2Q13868 293 aaKnown RBP16.72■□□□□ 0.27
SCN1B-206ENST00000638536 KLK9Q2XQG4 91 aa16.72■□□□□ 0.27
SCN1B-206ENST00000638536 CNPY1Q3B7I2 92 aa16.72■□□□□ 0.27
SCN1B-206ENST00000638536 ZNF57Q68EA5 555 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-206ENST00000638536 RANGRFQ9HD47 186 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-206ENST00000638536 AURKAIP1Q9NWT8 199 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-206ENST00000638536 PEF1Q9UBV8 284 aaKnown RBP16.72■□□□□ 0.27
SCN1B-206ENST00000638536 KLK9Q9UKQ9 250 aa16.72■□□□□ 0.27
SCN1B-206ENST00000638536 SEC14L6B5MCN3 397 aa16.71■□□□□ 0.27
SCN1B-206ENST00000638536 OVOL1O14753 267 aa16.71■□□□□ 0.27
SCN1B-206ENST00000638536 CDS2O95674 445 aa16.71■□□□□ 0.27
SCN1B-206ENST00000638536 MFAP2P55001 183 aa16.71■□□□□ 0.27
SCN1B-206ENST00000638536 SUPT4H1P63272 117 aaKnown RBP16.71■□□□□ 0.27
SCN1B-206ENST00000638536 EGFEM1PQ0D2K5 195 aa16.71■□□□□ 0.27
SCN1B-206ENST00000638536 Q6ZRM9 215 aa16.71■□□□□ 0.27
SCN1B-206ENST00000638536 OR4A16Q8NH70 328 aa16.71■□□□□ 0.27
SCN1B-206ENST00000638536 TSC22D3Q99576 134 aa16.71■□□□□ 0.27
SCN1B-206ENST00000638536 SRSF8Q9BRL6 282 aaKnown RBP16.71■□□□□ 0.27
SCN1B-206ENST00000638536 MCRIP2Q9BUT9 160 aaKnown RBP16.71■□□□□ 0.27
SCN1B-206ENST00000638536 DEFA4P12838 97 aa16.7■□□□□ 0.26
SCN1B-206ENST00000638536 AKR1C4P17516 323 aa16.7■□□□□ 0.26
SCN1B-206ENST00000638536 FAUP35544 74 aaKnown RBP16.7■□□□□ 0.26
SCN1B-206ENST00000638536 AKR1C2P52895 323 aa16.7■□□□□ 0.26
SCN1B-206ENST00000638536 SPINK9Q5DT21 86 aa16.7■□□□□ 0.26
SCN1B-206ENST00000638536 SELENOHQ8IZQ5 122 aaKnown RBP16.7■□□□□ 0.26
SCN1B-206ENST00000638536 OR5B3Q8NH48 314 aa16.7■□□□□ 0.26
SCN1B-206ENST00000638536 LINC00854A0A1B0GVQ3 168 aa16.7■□□□□ 0.26
SCN1B-206ENST00000638536 PDLIM3Q53GG5 364 aaPredicted RBP16.7■□□□□ 0.26
SCN1B-206ENST00000638536 LSM10Q969L4 123 aaKnown RBP16.7■□□□□ 0.26
SCN1B-206ENST00000638536 FKBP11Q9NYL4 201 aa16.7■□□□□ 0.26
SCN1B-206ENST00000638536 MFSD2BA6NFX1 497 aa16.69■□□□□ 0.26
SCN1B-206ENST00000638536 BMPR1BO00238 502 aa16.69■□□□□ 0.26
SCN1B-206ENST00000638536 CCR6P51684 374 aa16.69■□□□□ 0.26
SCN1B-206ENST00000638536 TMEM187Q14656 261 aa16.69■□□□□ 0.26
SCN1B-206ENST00000638536 CCDC140Q96MF4 163 aa16.69■□□□□ 0.26
SCN1B-206ENST00000638536 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.68■□□□□ 0.26
SCN1B-206ENST00000638536 PPP5D1E7EU14 171 aa16.68■□□□□ 0.26
SCN1B-206ENST00000638536 B3GALNT1O75752 331 aa16.68■□□□□ 0.26
SCN1B-206ENST00000638536 IL7P13232 177 aa16.68■□□□□ 0.26
SCN1B-206ENST00000638536 KLF5Q13887 457 aaPredicted RBP16.68■□□□□ 0.26
SCN1B-206ENST00000638536 C9orf66Q5T8R8 295 aa16.68■□□□□ 0.26
SCN1B-206ENST00000638536 TRIQKQ629K1 86 aa16.68■□□□□ 0.26
SCN1B-206ENST00000638536 SGPP2Q8IWX5 399 aa16.68■□□□□ 0.26
SCN1B-206ENST00000638536 GALNT14Q96FL9 552 aa16.68■□□□□ 0.26
SCN1B-206ENST00000638536 SCGB3A2Q96PL1 93 aa16.68■□□□□ 0.26
SCN1B-206ENST00000638536 HLA-AP01891 365 aaKnown RBP16.67■□□□□ 0.26
SCN1B-206ENST00000638536 HSPE1P61604 102 aaKnown RBP16.67■□□□□ 0.26
SCN1B-206ENST00000638536 TMEM268Q5VZI3 342 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 THOC7Q6I9Y2 204 aaKnown RBP16.67■□□□□ 0.26
SCN1B-206ENST00000638536 TMED4Q7Z7H5 227 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 RBPMSQ93062 196 aaKnown RBP16.67■□□□□ 0.26
SCN1B-206ENST00000638536 TMEM56Q96MV1 263 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 TMEM56-RWDD3S4R434 201 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 WI2-2373I1.2A0A1W2PRP0 233 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 ST8SIA3O43173 380 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 DHFRP00374 187 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms