RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 C1DQ13901 141 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 OR8G1Q15617 311 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TBC1D28Q2M2D7 210 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC75BQ2VPJ9 315 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 DEFB135Q30KP9 77 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF404Q494X3 552 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 LIN52Q52LA3 116 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 LUZP6Q538Z0 58 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 C10orf55Q5SWW7 151 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 UBE2UQ5VVX9 321 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 THOC7Q6I9Y2 204 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 C22orf42Q6IC83 251 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PRSS54Q6PEW0 395 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 DEGS2Q6QHC5 323 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 FAM131AQ6UXB0 335 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRN1Q6UXK5 716 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TMPRSS11AQ6ZMR5 421 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TMPPEQ6ZT21 453 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 BZW1Q7L1Q6 419 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 SSX6Q7RTT6 188 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 MRPL21Q7Z2W9 205 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PAGE2Q7Z2X7 111 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 DAZ4Q86SG3 579 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PDPNQ86YL7 162 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 HS3ST5Q8IZT8 346 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC22A24Q8N4F4 322 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF283Q8N7M2 679 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ASCC1Q8N9N2 400 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC75AQ8NAA5 344 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ST20-AS1Q8NBB2 130 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 BPIFCQ8NFQ6 507 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 OR4C13Q8NGP0 309 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 OR10K1Q8NGX5 313 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 OR6N2Q8NGY6 317 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 OR51A7Q8NH64 312 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 SGMS2Q8NHU3 365 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 MUC7Q8TAX7 377 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CMTM2Q8TAZ6 248 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 STAG3L4Q8TBR4 150 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 SFXN5Q8TD22 340 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 KLF14Q8TD94 323 aaPredicted RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TCP10LQ8TDR4 215 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ACMSDQ8TDX5 336 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 IFT81Q8WYA0 676 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 C11orf40Q8WZ69 217 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CDKL2Q92772 493 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 POP5Q969H6 163 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC38A4Q969I6 547 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 DDIT4LQ96D03 193 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 MUCL1Q96DR8 90 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ZHX1-C8orf76Q96EF9 292 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 NRBF2Q96F24 287 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 DUS3LQ96G46 650 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PPP1R2P1Q96PQ5 205 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PANX1Q96RD7 426 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TBX5Q99593 518 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 B9D2Q9BPU9 175 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PAIP2Q9BPZ3 127 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 NABP2Q9BQ15 211 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PRSS27Q9BQR3 290 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 UQCC2Q9BRT2 126 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CHCHD7Q9BUK0 85 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CHID1Q9BWS9 393 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TAPBPLQ9BX59 468 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TSGA10Q9BZW7 698 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 DPY30Q9C005 99 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ACTR3CQ9C0K3 210 aaPredicted RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 OR2H1Q9GZK4 316 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 RAB1BQ9H0U4 201 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 OR51I2Q9H344 312 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CENPHQ9H3R5 247 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TMEM38AQ9H6F2 299 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF442Q9H7R0 627 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF286AQ9HBT8 521 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 POPDC3Q9HBV1 291 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 RRAGDQ9NQL2 400 aaPredicted RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 DAZ1Q9NQZ3 744 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ZC4H2Q9NQZ6 224 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ACER3Q9NUN7 267 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ARMC1Q9NVT9 282 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 MCUBQ9NWR8 336 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 MRPL22Q9NWU5 206 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 C1orf109Q9NX04 203 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TAS2R9Q9NYW1 312 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CCDC167Q9P0B6 97 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 EMC3Q9P0I2 261 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 VAPAQ9P0L0 249 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 VPS29Q9UBQ0 182 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CLN8Q9UBY8 286 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 POFUT2Q9Y2G5 429 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 STK38LQ9Y2H1 464 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CARHSP1Q9Y2V2 147 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ACOT9Q9Y305 439 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 NDUFAF1Q9Y375 327 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC42Q9Y546 428 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 LHFPL6Q9Y693 200 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 COMMD3-BMI1R4GMX3 469 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PKD1P98161 4303 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 FAT2Q9NYQ8 4349 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 IGKV3-7A0A075B6H7 116 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms