RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 TMEM222Q9H0R3 208 aa10.48□□□□□ -0.73
SOX2-OT-246ENST00000628343 AKIP1Q9NQ31 210 aa10.48□□□□□ -0.73
SOX2-OT-246ENST00000628343 NDUFA4L2Q9NRX3 87 aa10.48□□□□□ -0.73
SOX2-OT-246ENST00000628343 PRNDQ9UKY0 176 aa10.48□□□□□ -0.73
SOX2-OT-246ENST00000628343 OR51B2Q9Y5P1 312 aa10.48□□□□□ -0.73
SOX2-OT-246ENST00000628343 A0A0G2JLM5 398 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 FAM223BA6NKX1 122 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 OR8U8P0C7N1 319 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 TRAPPC2P0DI81 140 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 TRAPPC2BP0DI82 140 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 IL7P13232 177 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 WT1-ASQ06250 92 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 FAM223AQ8IWN6 122 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 OR1L8Q8NGR8 309 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 USMG5Q96IX5 58 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 SCGB3A2Q96PL1 93 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 FANCD2OSQ96PS1 177 aa10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 SRSF8Q9BRL6 282 aaKnown RBP10.47□□□□□ -0.73
SOX2-OT-246ENST00000628343 A0A0G2JRQ6 117 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 LINC01619G3V211 115 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 OR2J3O76001 311 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 CDS2O95674 445 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 HSPB1P04792 205 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 AKR1C4P17516 323 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 AKR1C2P52895 323 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 SLURP1P55000 103 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 SUPT4H1P63272 117 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 DEFA6Q01524 100 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 KLK9Q2XQG4 91 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 THOC7Q6I9Y2 204 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 ZNF343Q6P1L6 599 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 NECAP1Q8NC96 275 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 OR5B3Q8NH48 314 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 DPF1Q92782 380 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 GALNT14Q96FL9 552 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 HINT2Q9BX68 163 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 KLK9Q9UKQ9 250 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 DMRT1Q9Y5R6 373 aa10.46□□□□□ -0.73
SOX2-OT-246ENST00000628343 IGLV11-55A0A075B6I3 123 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 A0A0B4J293 547 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 LINC00854A0A1B0GVQ3 168 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 ANKRD34BA5PLL1 514 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 NDUFB8O95169 186 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 DUS4LO95620 317 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 TRBV12-3P01733 135 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 OR13C7P0DN81 318 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 INPP1P49441 399 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 CCR6P51684 374 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 DHODHQ02127 395 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 ATP5G2Q06055 141 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 EXOSC2Q13868 293 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 TMEM187Q14656 261 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 C15orf32Q32M92 178 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 SGPP2Q8IWX5 399 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 SELENOHQ8IZQ5 122 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 OR4A16Q8NH70 328 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 DLX4Q92988 240 aaPredicted RBP10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 LSM10Q969L4 123 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 TMEM56Q96MV1 263 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 SLC25A21Q9BQT8 299 aaPredicted RBP10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 FKBP11Q9NYL4 201 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 PRR13Q9NZ81 148 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 PTTG2Q9NZH5 202 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 FBXL7Q9UJT9 491 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 TMEM56-RWDD3S4R434 201 aa10.45□□□□□ -0.74
SOX2-OT-246ENST00000628343 ATG12O94817 140 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 DHFRP00374 187 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 DEFA4P12838 97 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 HOXD3P31249 432 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 BTCP35070 178 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 TMEM268Q5VZI3 342 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 Q6ZRM9 215 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 LINC00299Q6ZSB3 139 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 HSD17B13Q7Z5P4 300 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 TMED4Q7Z7H5 227 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 ZNF429Q86V71 674 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 DCUN1D4Q92564 292 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 RBPMSQ93062 196 aaKnown RBP10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 MCRIP2Q9BUT9 160 aaKnown RBP10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 RANGRFQ9HD47 186 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 BATF3Q9NR55 127 aa10.44□□□□□ -0.74
SOX2-OT-246ENST00000628343 NAP1L6A6NFF2 107 aa10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 PRB2P02812 416 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 MFAP2P55001 183 aa10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 HSPE1P61604 102 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 PRCDQ00LT1 54 aa10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 RBMS2Q15434 407 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 RNASE11Q8TAA1 199 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 RRNAD1Q96FB5 475 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 PEF1Q9UBV8 284 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 KCNIP3Q9Y2W7 256 aa10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 S4R3C0 116 aa10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 TNCP24821 2201 aa10.43□□□□□ -0.74
SOX2-OT-246ENST00000628343 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-246ENST00000628343 MFSD2BA6NFX1 497 aa10.42□□□□□ -0.74
SOX2-OT-246ENST00000628343 SEC14L6B5MCN3 397 aa10.42□□□□□ -0.74
SOX2-OT-246ENST00000628343 BMPR1BO00238 502 aa10.42□□□□□ -0.74
SOX2-OT-246ENST00000628343 OVOL1O14753 267 aa10.42□□□□□ -0.74
SOX2-OT-246ENST00000628343 PLA2G10O15496 165 aa10.42□□□□□ -0.74
SOX2-OT-246ENST00000628343 ST8SIA3O43173 380 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms