RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 NDUFA4L2Q9NRX3 87 aa15.77■□□□□ 0.12
PTCD3-220ENST00000627371 IGLC7A0M8Q6 106 aa15.76■□□□□ 0.11
PTCD3-220ENST00000627371 PF4P02776 101 aa15.76■□□□□ 0.11
PTCD3-220ENST00000627371 CRYGCP07315 174 aa15.76■□□□□ 0.11
PTCD3-220ENST00000627371 TRAPPC2P0DI81 140 aa15.76■□□□□ 0.11
PTCD3-220ENST00000627371 TRAPPC2BP0DI82 140 aa15.76■□□□□ 0.11
PTCD3-220ENST00000627371 AREGP15514 252 aa15.76■□□□□ 0.11
PTCD3-220ENST00000627371 PSMB6P28072 239 aa15.76■□□□□ 0.11
PTCD3-220ENST00000627371 RUNX1Q01196 453 aa15.76■□□□□ 0.11
PTCD3-220ENST00000627371 IZUMO4Q1ZYL8 232 aa15.76■□□□□ 0.11
PTCD3-220ENST00000627371 TMEM268Q5VZI3 342 aa15.76■□□□□ 0.11
PTCD3-220ENST00000627371 RNASE11Q8TAA1 199 aaKnown RBP15.76■□□□□ 0.11
PTCD3-220ENST00000627371 A0A0G2JRQ6 117 aa15.75■□□□□ 0.11
PTCD3-220ENST00000627371 I3L521 148 aa15.75■□□□□ 0.11
PTCD3-220ENST00000627371 UPK1BO75841 260 aa15.75■□□□□ 0.11
PTCD3-220ENST00000627371 CTRB1P17538 263 aa15.75■□□□□ 0.11
PTCD3-220ENST00000627371 UBE2MP61081 183 aaKnown RBP15.75■□□□□ 0.11
PTCD3-220ENST00000627371 SRPXP78539 464 aa15.75■□□□□ 0.11
PTCD3-220ENST00000627371 DEFB136Q30KP8 78 aa15.75■□□□□ 0.11
PTCD3-220ENST00000627371 CTRB2Q6GPI1 263 aa15.75■□□□□ 0.11
PTCD3-220ENST00000627371 HSD17B13Q7Z5P4 300 aaPredicted RBP15.75■□□□□ 0.11
PTCD3-220ENST00000627371 ZNF429Q86V71 674 aa15.75■□□□□ 0.11
PTCD3-220ENST00000627371 FAM219AQ8IW50 185 aa15.75■□□□□ 0.11
PTCD3-220ENST00000627371 PRR13Q9NZ81 148 aa15.75■□□□□ 0.11
PTCD3-220ENST00000627371 TRBV9A0A0B4J1U6 114 aa15.74■□□□□ 0.11
PTCD3-220ENST00000627371 A0A0G2JLM5 398 aa15.74■□□□□ 0.11
PTCD3-220ENST00000627371 RBMXL2O75526 392 aaKnown RBP15.74■□□□□ 0.11
PTCD3-220ENST00000627371 PRH1P02810 166 aa15.74■□□□□ 0.11
PTCD3-220ENST00000627371 LGALS1P09382 135 aaKnown RBP15.74■□□□□ 0.11
PTCD3-220ENST00000627371 MYCNOSP40205 109 aa15.74■□□□□ 0.11
PTCD3-220ENST00000627371 OR10W1Q8NGF6 305 aa15.74■□□□□ 0.11
PTCD3-220ENST00000627371 LSM10Q969L4 123 aaKnown RBP15.74■□□□□ 0.11
PTCD3-220ENST00000627371 RAX2Q96IS3 184 aa15.74■□□□□ 0.11
PTCD3-220ENST00000627371 P2RX4Q99571 388 aa15.74■□□□□ 0.11
PTCD3-220ENST00000627371 A0A0B4J293 547 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 CCL24O00175 119 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 DHFRP00374 187 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 REG1AP05451 166 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 VAMP1P23763 118 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 WT1-ASQ06250 92 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 PPP1R1AQ13522 171 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 C19orf35Q6ZS72 473 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 LGI3Q8N145 548 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 SLC35G3Q8N808 338 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 USMG5Q96IX5 58 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 DUX3Q96PT4 197 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 OR5B12Q96R08 314 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 HINT2Q9BX68 163 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 TBC1D24Q9ULP9 559 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 FLVCR2Q9UPI3 526 aa15.73■□□□□ 0.11
PTCD3-220ENST00000627371 A0A0B4J2A0 478 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 PIGBOS1A0A0B4J2F0 54 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 C13orf42A0A1B0GVH6 325 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 FAM223BA6NKX1 122 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 SFT2D2O95562 160 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 IGHV3-11P01762 117 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 HSPE1P61604 102 aaKnown RBP15.72■□□□□ 0.11
PTCD3-220ENST00000627371 RHOGP84095 191 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 PRCDQ00LT1 54 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 DEFA5Q01523 94 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 ASAH1Q13510 395 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 FHL3Q13643 280 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 KLK9Q2XQG4 91 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 FAM223AQ8IWN6 122 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 LINC00482Q8N8I6 264 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 SHPKQ9UHJ6 478 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 KLK9Q9UKQ9 250 aa15.72■□□□□ 0.11
PTCD3-220ENST00000627371 OR13C7P0DN81 318 aa15.71■□□□□ 0.11
PTCD3-220ENST00000627371 Q6ZRM9 215 aa15.71■□□□□ 0.11
PTCD3-220ENST00000627371 MRPL41Q8IXM3 137 aaKnown RBP15.71■□□□□ 0.11
PTCD3-220ENST00000627371 NECAP1Q8NC96 275 aa15.71■□□□□ 0.11
PTCD3-220ENST00000627371 OR11H1Q8NG94 326 aa15.71■□□□□ 0.11
PTCD3-220ENST00000627371 GPR146Q96CH1 333 aa15.71■□□□□ 0.11
PTCD3-220ENST00000627371 FANCD2OSQ96PS1 177 aa15.71■□□□□ 0.11
PTCD3-220ENST00000627371 ALX4Q9H161 411 aaPredicted RBP15.71■□□□□ 0.11
PTCD3-220ENST00000627371 C20orf85Q9H1P6 137 aa15.71■□□□□ 0.11
PTCD3-220ENST00000627371 NBEAL1Q6ZS30 2694 aa15.71■□□□□ 0.1
PTCD3-220ENST00000627371 DUXBA0A1W2PPF3 345 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 ST8SIA3O43173 380 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 DEFA4P12838 97 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 HIST1H1BP16401 226 aaKnown RBP15.7■□□□□ 0.1
PTCD3-220ENST00000627371 MECP2P51608 486 aaKnown RBP15.7■□□□□ 0.1
PTCD3-220ENST00000627371 IFITM3Q01628 133 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 ANKRD55Q3KP44 614 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 AARDQ4LEZ3 155 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 MZT2BQ6NZ67 158 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 LRTM2Q8N967 370 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 WFDC9Q8NEX5 89 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 PDCD10Q9BUL8 212 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 CACNG5Q9UF02 275 aa15.7■□□□□ 0.1
PTCD3-220ENST00000627371 IGLV11-55A0A075B6I3 123 aa15.69■□□□□ 0.1
PTCD3-220ENST00000627371 OR2J3O76001 311 aa15.69■□□□□ 0.1
PTCD3-220ENST00000627371 TCRBP04435 133 aa15.69■□□□□ 0.1
PTCD3-220ENST00000627371 ANXA7P20073 488 aaKnown RBP15.69■□□□□ 0.1
PTCD3-220ENST00000627371 CD33P20138 364 aa15.69■□□□□ 0.1
PTCD3-220ENST00000627371 ZNF616Q08AN1 781 aa15.69■□□□□ 0.1
PTCD3-220ENST00000627371 NMSQ5H8A3 153 aa15.69■□□□□ 0.1
PTCD3-220ENST00000627371 LYZL2Q7Z4W2 148 aa15.69■□□□□ 0.1
PTCD3-220ENST00000627371 OR1N2Q8NGR9 330 aa15.69■□□□□ 0.1
PTCD3-220ENST00000627371 PLEKHA3Q9HB20 300 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms