RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FAM3BP58499 235 aaPredicted RBP7.7□□□□□ -1.18
PDPN-212ENST00000621990 PYY3Q5JQD4 70 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 COA6Q5JTJ3 125 aaKnown RBP7.7□□□□□ -1.18
PDPN-212ENST00000621990 DNLZQ5SXM8 178 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 GFI1BQ5VTD9 330 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 CISD2Q8N5K1 135 aaKnown RBP7.7□□□□□ -1.18
PDPN-212ENST00000621990 OR5B3Q8NH48 314 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 OSR1Q8TAX0 266 aaPredicted RBP7.7□□□□□ -1.18
PDPN-212ENST00000621990 TMEM204Q9BSN7 226 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 SLC35D1Q9NTN3 355 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 FKBP11Q9NYL4 201 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 MIOXQ9UGB7 285 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 PITPNC1Q9UKF7 332 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 ARL2-SNX15V9GYD0 113 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 ZFHX2Q9C0A1 2572 aaPredicted RBP7.69□□□□□ -1.18
PDPN-212ENST00000621990 INS-IGF2F8WCM5 200 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 TMEM178BH3BS89 294 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 J3QR06 171 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 LINC00869P0C866 280 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 RHOBP62745 196 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 LCN2P80188 198 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 RAB31Q13636 194 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 C2orf83Q53S99 150 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 FAM71F2Q6NXP2 309 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 OR5AN1Q8NGI8 311 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 ELOVL1Q9BW60 279 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 PLEKHA3Q9HB20 300 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 TP53TG5Q9Y2B4 290 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 GVINP1Q7Z2Y8 2422 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 TEX50A0A1B0GTY4 177 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 NDUFB4O95168 129 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 MYOD1P15172 320 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 UBE2G2P60604 165 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 RPL31P62899 125 aaKnown RBP7.69□□□□□ -1.18
PDPN-212ENST00000621990 CST9LP1Q5W188 147 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 WFDC8Q8IUA0 241 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 OR1L8Q8NGR8 309 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 SSMEM1Q8WWF3 244 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 DERL1Q9BUN8 251 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 GPR61Q9BZJ8 451 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 SEPSECSQ9HD40 501 aaKnown RBP7.69□□□□□ -1.18
PDPN-212ENST00000621990 SLC45A2Q9UMX9 530 aa7.69□□□□□ -1.18
PDPN-212ENST00000621990 RIF1Q5UIP0 2472 aaKnown RBP7.68□□□□□ -1.18
PDPN-212ENST00000621990 ICE1Q9Y2F5 2266 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 TRBV20OR9-2A0A075B6H5 130 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 LINC00587B1AMM8 73 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 PPP5D1E7EU14 171 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 NDUFB7P17568 137 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 GCHFRP30047 84 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 ACTL10Q5JWF8 245 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 TMEM200BQ69YZ2 307 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 TMEM144Q7Z5S9 345 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 PNKDQ8N490 385 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 LINC00311Q8N616 119 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 NECAP1Q8NC96 275 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 OR2T10Q8NGZ9 312 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 C11orf52Q96A22 123 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 ZNF714Q96N38 554 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 ZNRD1Q9P1U0 126 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 RP1L1Q8IWN7 2480 aaPredicted RBP7.68□□□□□ -1.18
PDPN-212ENST00000621990 H0YJW9 148 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 SAA1P0DJI8 122 aaPredicted RBP7.68□□□□□ -1.18
PDPN-212ENST00000621990 AREGP15514 252 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 PDLIM4P50479 330 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 TMEM177Q53S58 311 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 PCGF1Q9BSM1 259 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 SAP30LQ9HAJ7 183 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 YTHDF2Q9Y5A9 579 aaKnown RBP7.68□□□□□ -1.18
PDPN-212ENST00000621990 DCHS1Q96JQ0 3298 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 CEP250Q9BV73 2442 aa7.68□□□□□ -1.18
PDPN-212ENST00000621990 PPIAL4EA0A075B759 164 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 A0A087X0M5 115 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 A0A1B0GX30 115 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 PPIAL4DF5H284 164 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 PPIAL4FP0DN26 164 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 IGFBP2P18065 325 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 ZNF137PP52743 207 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 FOXL1Q12952 345 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 C4orf17Q53FE4 359 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 KCNIP4Q6PIL6 250 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 TMEM183AQ8IXX5 376 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 SLC35E1Q96K37 410 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 MRPL20Q9BYC9 149 aaKnown RBP7.67□□□□□ -1.18
PDPN-212ENST00000621990 NDUFA4L2Q9NRX3 87 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 KAAG1Q9UBP8 84 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 PPIAL4AQ9Y536 164 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 DMRT1Q9Y5R6 373 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 YLPM1P49750 1951 aaKnown RBP7.67□□□□□ -1.18
PDPN-212ENST00000621990 IGKV1OR2-108A0A075B7D4 117 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 RNASE2P10153 161 aaKnown RBP7.67□□□□□ -1.18
PDPN-212ENST00000621990 SPATA31B1PQ5VZV4 182 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 GFRALQ6UXV0 394 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 ZCCHC24Q8N2G6 241 aaKnown RBP7.67□□□□□ -1.18
PDPN-212ENST00000621990 ZNF114Q8NC26 417 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 OR4A5Q8NH83 315 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 ACY3Q96HD9 319 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 BTF3L4Q96K17 158 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 HIST1H2BLQ99880 126 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 C19orf24Q9BVV8 132 aa7.67□□□□□ -1.18
PDPN-212ENST00000621990 TNCP24821 2201 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms