RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 ZNF48Q96MX3 618 aaPredicted RBP8.48□□□□□ -1.05
CPNE3-212ENST00000621783 ARPC5LQ9BPX5 153 aa8.48□□□□□ -1.05
CPNE3-212ENST00000621783 SLC25A31Q9H0C2 315 aa8.48□□□□□ -1.05
CPNE3-212ENST00000621783 HIPK2Q9H2X6 1198 aa8.48□□□□□ -1.05
CPNE3-212ENST00000621783 HEYLQ9NQ87 328 aaPredicted RBP8.48□□□□□ -1.05
CPNE3-212ENST00000621783 C1RLQ9NZP8 487 aa8.48□□□□□ -1.05
CPNE3-212ENST00000621783 MOB4Q9Y3A3 225 aa8.48□□□□□ -1.05
CPNE3-212ENST00000621783 A0A1W2PN81 502 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 KANTRA0A1W2PQU2 76 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 A6NDX4 124 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 C15orf62A8K5M9 175 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 LY86O95711 162 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 METTL15P1P0C7V9 234 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 C4BPBP20851 252 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 CHRNA7P36544 502 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 BAXQ07812 192 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 LY6EQ16553 131 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 DMRTA1Q5VZB9 504 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 TMEM14EPQ6UXP3 125 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 HAPLN4Q86UW8 402 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 STX12Q86Y82 276 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 C5orf56Q8N8D9 126 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 SLC24A4Q8NFF2 622 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 OR10W1Q8NGF6 305 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 SRSF12Q8WXF0 261 aaKnown RBP8.47□□□□□ -1.05
CPNE3-212ENST00000621783 RBM14Q96PK6 669 aaKnown RBP8.47□□□□□ -1.05
CPNE3-212ENST00000621783 SMIM3Q9BZL3 60 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 FBXL17Q9UF56 701 aa8.47□□□□□ -1.05
CPNE3-212ENST00000621783 STRAPQ9Y3F4 350 aaKnown RBP8.47□□□□□ -1.05
CPNE3-212ENST00000621783 IGLC7A0M8Q6 106 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 TEX22C9J3V5 150 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 INS-IGF2F8WCM5 200 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 CST7O76096 145 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 IGHV4-59P01825 116 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 HLA-DRB1P01911 266 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 NPY1RP25929 384 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 SRP14P37108 136 aaKnown RBP8.46□□□□□ -1.06
CPNE3-212ENST00000621783 SULT1A1P50225 295 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 NDPQ00604 133 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 NHLH2Q02577 135 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 STPG2Q8N412 459 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 ARPC1AQ92747 370 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 SMR3AQ99954 134 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 RASL11BQ9BPW5 248 aa8.46□□□□□ -1.06
CPNE3-212ENST00000621783 PAIP2BQ9ULR5 123 aaKnown RBP8.46□□□□□ -1.06
CPNE3-212ENST00000621783 ASH1LQ9NR48 2969 aaKnown RBP8.46□□□□□ -1.06
CPNE3-212ENST00000621783 IGHV7-81A0A0B4J1V7 117 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 PMS2P5A8MQ11 134 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 FGF16O43320 207 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 CNIH1O95406 144 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 LY6G6DO95868 133 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 IFNA10P01566 189 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 OR8U8P0C7N1 319 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 RNASE2P10153 161 aaKnown RBP8.45□□□□□ -1.06
CPNE3-212ENST00000621783 HNF1AP20823 631 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 IER3P46695 156 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
CPNE3-212ENST00000621783 WT1-ASQ06250 92 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 ARL16Q0P5N6 197 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 FXYD3Q14802 87 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 BSXQ3C1V8 233 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 Q6YL49 198 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 TMEM217Q8N7C4 229 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 OR1S2Q8NGQ3 325 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 ABHD5Q8WTS1 349 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 TMEM170AQ8WVE7 144 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 HSPB9Q9BQS6 159 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 ZNF471Q9BX82 626 aaPredicted RBP8.45□□□□□ -1.06
CPNE3-212ENST00000621783 PRDM13Q9H4Q3 707 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 CYTL1Q9NRR1 136 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 PITPNC1Q9UKF7 332 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 CSMD1Q96PZ7 3565 aa8.45□□□□□ -1.06
CPNE3-212ENST00000621783 ITPR3Q14573 2671 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 BTBD17A6NE02 478 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 SH2D7A6NKC9 451 aaPredicted RBP8.44□□□□□ -1.06
CPNE3-212ENST00000621783 TAAR5O14804 337 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 AMY1AP04745 511 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 REG1AP05451 166 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 APELAP0DMC3 54 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 OR13C7P0DN81 318 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 AREGP15514 252 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 HTR2BP41595 481 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 RAB11AP62491 216 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 UBA52P62987 128 aaKnown RBP8.44□□□□□ -1.06
CPNE3-212ENST00000621783 CX3CL1P78423 397 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 ERHP84090 104 aaKnown RBP8.44□□□□□ -1.06
CPNE3-212ENST00000621783 CLINT1Q14677 625 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 OR8G2PQ6IF36 304 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 ZNF562Q6V9R5 426 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 C16orf82Q7Z2V1 217 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 MRPL41Q8IXM3 137 aaKnown RBP8.44□□□□□ -1.06
CPNE3-212ENST00000621783 OR5C1Q8NGR4 320 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 OR5R1Q8NH85 324 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 SSMEM1Q8WWF3 244 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 SRSF8Q9BRL6 282 aaKnown RBP8.44□□□□□ -1.06
CPNE3-212ENST00000621783 FAM103A1Q9BTL3 118 aaKnown RBP8.44□□□□□ -1.06
CPNE3-212ENST00000621783 WFDC1Q9HC57 220 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 TMEM160Q9NX00 188 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 FBXO7Q9Y3I1 522 aa8.44□□□□□ -1.06
CPNE3-212ENST00000621783 U3KQ87 197 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms