RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 NCOR1P1Q9H4R4 102 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 C5orf66Q9H5L9 145 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 PLEKHF2Q9H8W4 249 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 TAF9BQ9HBM6 251 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 ZC4H2Q9NQZ6 224 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 SLC2A9Q9NRM0 540 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 KIF25Q9UIL4 384 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 TGP01266 2768 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 ESPL1Q14674 2120 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 DIDO1Q9BTC0 2240 aaKnown RBP3.72□□□□□ -1.81
VPS29-212ENST00000621131 TLN2Q9Y4G6 2542 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 PPIAL4EA0A075B759 164 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 IGHV1-69-2A0A0G2JMI3 117 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 hCG_1809904A0A1W2PP81 198 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 A0A1W2PPE2 198 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 A0A1W2PR64 198 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 hADV38S2A0JD32 116 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 ODAMA1E959 279 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 HMSDA8MTL9 139 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 PPIAL4DF5H284 164 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 H0Y980 276 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 SMLR1H3BR10 107 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 LGALS8O00214 317 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 WRBO00258 174 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 CCSO14618 274 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 HSD17B6O14756 317 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 ARPC5O15511 151 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 NDUFB3O43676 98 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 NDUFA2O43678 99 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 OR2F2O95006 317 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 SIX6O95475 246 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 CDS2O95674 445 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 CYB5R3P00387 301 aaPredicted RBP3.72□□□□□ -1.81
VPS29-212ENST00000621131 CD8AP01732 235 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 SERPINE2P07093 398 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 OR5AC1P0C628 307 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 PPIAL4FP0DN26 164 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 PSG2P11465 335 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 SLC25A4P12235 298 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 RPA2P15927 270 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 PSMB6P28072 239 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 GNRHRP30968 328 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 S100A11P31949 105 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 CEACAM6P40199 344 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 OR3A1P47881 315 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 UQCRFS1P47985 274 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 CEBPDP49716 269 aaPredicted RBP3.72□□□□□ -1.81
VPS29-212ENST00000621131 PPOXP50336 477 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 RAB7AP51149 207 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 H2BFSP57053 126 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 ERVK-16P61578 105 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 UBA52P62987 128 aaKnown RBP3.72□□□□□ -1.81
VPS29-212ENST00000621131 CCL8P80075 99 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 HTD2P86397 168 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 PAX5Q02548 391 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 OR2F1Q13607 317 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 ZNF345Q14585 488 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 GNMTQ14749 295 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 IAH1Q2TAA2 248 aaPredicted RBP3.72□□□□□ -1.81
VPS29-212ENST00000621131 HFEQ30201 348 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 LRRC37A5PQ49AS3 106 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 LRRC10Q5BKY1 277 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 ZNF660Q6AZW8 331 aaPredicted RBP3.72□□□□□ -1.81
VPS29-212ENST00000621131 ZNF546Q86UE3 836 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 GAPTQ8N292 157 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 MUC15Q8N387 334 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 C9orf62Q8N4C0 152 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 ZNF645Q8N7E2 425 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 TCTEX1D1Q8N7M0 179 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 LRTM2Q8N967 370 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 OR8H1Q8NGG4 311 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 LINC01560Q8TB33 94 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 IL22RA2Q969J5 263 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 ARL11Q969Q4 196 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 TMEM230Q96A57 120 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 C14orf79Q96F83 325 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 SDSLQ96GA7 329 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 TIMD4Q96H15 378 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 ABHD14BQ96IU4 210 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 MFFQ9GZY8 342 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 OR2S2Q9NQN1 319 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 RDH8Q9NYR8 311 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 ZNF581Q9P0T4 197 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 GNG12Q9UBI6 72 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 JPT1Q9UK76 154 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 PPIAL4AQ9Y536 164 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 POLEQ07864 2286 aa3.72□□□□□ -1.81
VPS29-212ENST00000621131 CUBNO60494 3623 aa3.71□□□□□ -1.81
VPS29-212ENST00000621131 IGKV1D-17A0A075B6S4 117 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 IGHV3OR15-7A0A075B7D8 119 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 ZNF729A6NN14 1252 aaPredicted RBP3.71□□□□□ -1.82
VPS29-212ENST00000621131 E7EQL1 145 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 K7N7A8 449 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 SIGLEC5O15389 551 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 LHBP01229 141 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 HBZP02008 142 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 RCC1P18754 421 aaPredicted RBP3.71□□□□□ -1.82
VPS29-212ENST00000621131 KIR2DS2P43631 304 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 AKR1C2P52895 323 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 AP2S1P53680 142 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms