RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 FAM71E2Q8N5Q1 922 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 NOL4LQ96MY1 436 aaPredicted RBP12.71□□□□□ -0.38
CD40-207ENST00000620709 RNF126Q9BV68 326 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 MFFQ9GZY8 342 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 COA4Q9NYJ1 87 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 CACNG5Q9UF02 275 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 LINC00527Q9UJ94 153 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 TNFSF18Q9UNG2 199 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 IGHV3-72A0A0B4J1Y9 119 aa12.7□□□□□ -0.38
CD40-207ENST00000620709 FAM90A9PA6NNJ1 464 aa12.7□□□□□ -0.38
CD40-207ENST00000620709 PITX3O75364 302 aa12.7□□□□□ -0.38
CD40-207ENST00000620709 CRYZL1O95825 349 aa12.7□□□□□ -0.38
CD40-207ENST00000620709 P0C879 139 aa12.7□□□□□ -0.38
CD40-207ENST00000620709 NQO2P16083 231 aa12.7□□□□□ -0.38
CD40-207ENST00000620709 CXCL2P19875 107 aa12.7□□□□□ -0.38
CD40-207ENST00000620709 OR8H3Q8N146 312 aa12.7□□□□□ -0.38
CD40-207ENST00000620709 INO80EQ8NBZ0 244 aaPredicted RBP12.7□□□□□ -0.38
CD40-207ENST00000620709 NABP2Q9BQ15 211 aa12.7□□□□□ -0.38
CD40-207ENST00000620709 OR5AC2Q9NZP5 309 aa12.7□□□□□ -0.38
CD40-207ENST00000620709 NCBP2LA6PVI3 153 aaKnown RBP12.69□□□□□ -0.38
CD40-207ENST00000620709 TXNL1O43396 289 aa12.69□□□□□ -0.38
CD40-207ENST00000620709 NUP62P37198 522 aaPredicted RBP12.69□□□□□ -0.38
CD40-207ENST00000620709 OR2F1Q13607 317 aa12.69□□□□□ -0.38
CD40-207ENST00000620709 ZNF345Q14585 488 aa12.69□□□□□ -0.38
CD40-207ENST00000620709 IZUMO4Q1ZYL8 232 aa12.69□□□□□ -0.38
CD40-207ENST00000620709 Q6ZRM9 215 aa12.69□□□□□ -0.38
CD40-207ENST00000620709 C5orf56Q8N8D9 126 aa12.69□□□□□ -0.38
CD40-207ENST00000620709 WFDC9Q8NEX5 89 aa12.69□□□□□ -0.38
CD40-207ENST00000620709 DMBX1Q8NFW5 382 aa12.69□□□□□ -0.38
CD40-207ENST00000620709 OR5AN1Q8NGI8 311 aa12.69□□□□□ -0.38
CD40-207ENST00000620709 A0A0D9SG52 128 aa12.68□□□□□ -0.38
CD40-207ENST00000620709 NUDT19A8MXV4 375 aa12.68□□□□□ -0.38
CD40-207ENST00000620709 E5RGE8 158 aa12.68□□□□□ -0.38
CD40-207ENST00000620709 H0YJW9 148 aa12.68□□□□□ -0.38
CD40-207ENST00000620709 WRBO00258 174 aa12.68□□□□□ -0.38
CD40-207ENST00000620709 HRASP01112 189 aa12.68□□□□□ -0.38
CD40-207ENST00000620709 GAPDHP04406 335 aaKnown RBP12.68□□□□□ -0.38
CD40-207ENST00000620709 ID3Q02535 119 aa12.68□□□□□ -0.38
CD40-207ENST00000620709 ACOT7LQ6ZUV0 252 aa12.68□□□□□ -0.38
CD40-207ENST00000620709 PDPNQ86YL7 162 aa12.68□□□□□ -0.38
CD40-207ENST00000620709 RCL1Q9Y2P8 373 aaKnown RBP12.68□□□□□ -0.38
CD40-207ENST00000620709 NSG2Q9Y328 171 aa12.68□□□□□ -0.38
CD40-207ENST00000620709 IGHV1-3A0A0C4DH29 117 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 RNF222A6NCQ9 220 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 FAM90A26D6RGX4 464 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 PVALBP20472 110 aaPredicted RBP12.67□□□□□ -0.38
CD40-207ENST00000620709 S100A11P31949 105 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 CXorf66Q5JRM2 361 aaPredicted RBP12.67□□□□□ -0.38
CD40-207ENST00000620709 TMUB2Q71RG4 321 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 SLC35E3Q7Z769 313 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 RCC1LQ96I51 464 aaKnown RBP12.67□□□□□ -0.38
CD40-207ENST00000620709 AIFM2Q9BRQ8 373 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 H7C2Y5 167 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 FGF16O43320 207 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 MC5RP33032 325 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 POLR2GP62487 172 aaKnown RBP eCLIP12.67□□□□□ -0.38
CD40-207ENST00000620709 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 DEFB121Q5J5C9 76 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 KCNRGQ8N5I3 272 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 OSR1Q8TAX0 266 aaPredicted RBP12.67□□□□□ -0.38
CD40-207ENST00000620709 GON7Q9BXV9 100 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 ARL6Q9H0F7 186 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.67□□□□□ -0.38
CD40-207ENST00000620709 WASHC3Q9Y3C0 194 aa12.67□□□□□ -0.38
CD40-207ENST00000620709 SSSCA1O60232 199 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 TSC22D2O75157 780 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 NXPH3O95157 252 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 HOXD3P31249 432 aaPredicted RBP12.66□□□□□ -0.38
CD40-207ENST00000620709 AP2S1P53680 142 aaPredicted RBP12.66□□□□□ -0.38
CD40-207ENST00000620709 RPL23AP62750 156 aaKnown RBP12.66□□□□□ -0.38
CD40-207ENST00000620709 SLC35B1P78383 322 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 OPCMLQ14982 345 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 TMEM177Q53S58 311 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 C18orf65Q6ZTR6 163 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 SSX9Q7RTT3 188 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 EAF1Q96JC9 268 aaPredicted RBP12.66□□□□□ -0.38
CD40-207ENST00000620709 RHOVQ96L33 236 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 AQP10Q96PS8 301 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 SLA2Q9H6Q3 261 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 TMEM140Q9NV12 185 aa12.66□□□□□ -0.38
CD40-207ENST00000620709 SHOXO15266 292 aa12.65□□□□□ -0.38
CD40-207ENST00000620709 RBMXL2O75526 392 aaKnown RBP12.65□□□□□ -0.38
CD40-207ENST00000620709 IGKV1-16P04430 117 aa12.65□□□□□ -0.38
CD40-207ENST00000620709 P2RY1P47900 373 aa12.65□□□□□ -0.38
CD40-207ENST00000620709 VAMP2P63027 116 aa12.65□□□□□ -0.38
CD40-207ENST00000620709 C8orf86Q6ZUL3 223 aa12.65□□□□□ -0.38
CD40-207ENST00000620709 KLHL30-AS1Q8NEE0 82 aa12.65□□□□□ -0.38
CD40-207ENST00000620709 OR2T10Q8NGZ9 312 aa12.65□□□□□ -0.38
CD40-207ENST00000620709 FLYWCH2Q96CP2 140 aaKnown RBP12.65□□□□□ -0.38
CD40-207ENST00000620709 RBMXL1Q96E39 390 aaKnown RBP12.65□□□□□ -0.38
CD40-207ENST00000620709 HARBI1Q96MB7 349 aa12.65□□□□□ -0.38
CD40-207ENST00000620709 MAGT1Q9H0U3 335 aa12.65□□□□□ -0.38
CD40-207ENST00000620709 CACFD1Q9UGQ2 172 aa12.65□□□□□ -0.38
CD40-207ENST00000620709 KANTRA0A1W2PQU2 76 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 LINC01548A6NM66 108 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 SYNGR2O43760 224 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 MED6O75586 246 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 OR9G9P0C7N8 305 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 MRPL41Q8IXM3 137 aaKnown RBP12.64□□□□□ -0.39
CD40-207ENST00000620709 VKORC1L1Q8N0U8 176 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms